SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_016206 |
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Gene Symbol: | VGLL3 |
Description: | Homo sapiens vestigial like 3 (Drosophila) (VGLL3), mRNA. |
Gene Location: | chr3(-):86987122-87040257 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86938094A>G | COSN6782711 | RK183_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4659a-3p |
aacagaaatGAAGAAAaat |
11 |
UUUCUUCU | m7a | (m6a->m7a) | 0.076000 | 0.003000 |
-0.010000 |
|
hsa-miR-4659b-3p |
aacagaaatGAAGAAAaat |
11 |
UUUCUUCU | m7a | (m6a->m7a) | 0.076000 | 0.003000 | No effect | |
hsa-miR-5696 |
aacagAAATGAagaaaaat |
3 |
CUCAUUUA | m6b | Created | 0.430000 | 0.413000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86938666C>G | COSN5150336 | PD3890a | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-383 |
gctgCTGATCaataaatga |
7 |
AGAUCAGA | m6b | Disrupted | -0.093000 | no TS | No effect | |
hsa-miR-4772-5p |
gctgCTGATCAataaatga |
7 |
UGAUCAGG | m7a | Disrupted | -0.094000 | no TS |
0.040000 |
|
hsa-miR-664-3p |
gctgctgATGAATAaatga |
6 |
UAUUCAUU | m7a | Created | 0.153000 | 0.197000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86938959T>C | COSN5544632 | RK155_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-570-3p |
tgaagtgTGTTTTCtctgg |
9 |
CGAAAACA | m7b | Disrupted | 0.357000 | 0.258000 | No effect | |
hsa-miR-603 |
tgaAGTGTGTtttctctgg |
0 | CACACACU | m7b | (m7b->m6c) | -0.053000 | no TS |
0.250000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939201C>T | COSN8929717 | SS6003302 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4275 |
tcttGTAATTGagaaggac |
5 |
CCAAUUAC | m7b | Created | 0.238000 | 0.328000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939268T>C | COSN8929718 | SS6003317 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3691-3p |
gattagGACTTGGagccat |
0 | ACCAAGUC | m7b | Disrupted | -0.096000 | -0.053000 |
0.020000 |
|
hsa-miR-5695 |
gattaggaCTTGGAGccat |
0 | ACUCCAAG | m7b | Disrupted | -0.208000 | -0.165000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939378T>C | ICGC_72A824C6-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4530 |
cccaaagTGCTGGGattac |
0 | CCCAGCAG | m7a | Created | -0.076 | -0.076 |
-0.2 |
|
hsa-miR-4733-5p |
cccaaagtgTTGGGATTac |
0 | AAUCCCAA | m8a | (m8a->m7a) | 0.052 | no TS |
0.76 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939450A>G | ICGC_D8AB4C62-2A78-11E2-B303-24FD496BB9B8 | CPCG_0103_Pr_P_P6 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-605 |
agagacGGGATTTcaccat |
0 | UAAAUCCC | m7b | Disrupted | 0.006 | -0.079 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939526C>T | COSN14442081 | 8066037 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1827 |
cccCTGCCTCAgcctctcg |
2 |
UGAGGCAG | m8a | Disrupted | 0.026000 | -0.038000 |
0.020000 |
|
hsa-miR-3714 |
cccCTGCCTTagcctctcg |
1 |
GAAGGCAG | m7b | (m6c->m7b) | 0.121000 | 0.242000 | No effect | |
hsa-miR-3910 |
ccccTGCCTTagcctctcg |
0 | AAAGGCAU | m6b | Created | no TS | 0.084000 | No effect | |
hsa-miR-3929 |
cccctgccTCAGCCTCtcg |
8 |
GAGGCUGA | m8a | Disrupted | 0.123000 | 0.018000 |
0.030000 |
|
hsa-miR-3975 |
cccctgcctTAGCCTCtcg |
0 | UGAGGCUA | m7b | (m6b->m7b) | no TS | 0.031000 |
-0.770000 |
|
hsa-miR-4419b |
cccctgccTCAGCCTCtcg |
8 |
GAGGCUGA | m8a | Disrupted | 0.105000 | 0.000000 |
0.020000 |
|
hsa-miR-4478 |
cccctgccTCAGCCTCtcg |
8 |
GAGGCUGA | m8a | Disrupted | 0.104000 | 0.018000 |
0.040000 |
|
hsa-miR-4649-3p |
cccctGCCTCAGcctctcg |
2 |
UCUGAGGC | m7b | Disrupted | 0.048000 | no TS |
0.070000 |
|
hsa-miR-485-5p |
cccctgcctCAGCCTCTcg |
2 |
AGAGGCUG | m8a | (m8a->m7a) | 0.038000 | no TS |
0.170000 |
|
hsa-miR-940 |
ccCCTGCCTTagcctctcg |
1 |
AAGGCAGG | m8a | (m7b->m8a) | 0.106000 | 0.079000 |
-0.390000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939565C>G | ICGC_C02CE11E-2A78-11E2-BDED-1EFD496BB9B8 | CPCG_0103_Pr_P_P4 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-122-5p |
cggctCACTCCAacctcca |
0 | UGGAGUGU | m7a | Disrupted | -0.067 | -0.125 | No effect | |
hsa-miR-3198 |
cggctcACTCCAacctcca |
0 | GUGGAGUC | m6b | Disrupted | 0.064 | no TS |
2.15 |
|
hsa-miR-4309 |
cggctcACTCCAacctcca |
0 | CUGGAGUC | m6b | Disrupted | 0.064 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939921A>T | COSN15284431 | SM-4B295 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4728-3p |
catTCAGCATagatcttag |
2 |
CAUGCUGA | m7b | (m6c->m7b) | -0.365000 | -0.370000 | No effect | |
hsa-miR-628-5p |
catTCAGCATagatcttag |
1 |
AUGCUGAC | m7a | (m6b->m7a) | -0.180000 | -0.184000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86939989T>A | COSN15372044 | 0091_CRUK_PC_0091_T1_DNA | [prostate][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-2054 |
ctacATTACAacaacgata |
2 |
CUGUAAUA | m6b | Created | 0.331000 | 0.424000 |
0.010000 |
|
hsa-miR-3613-5p |
ctacatTACAACAacgata |
2 |
UGUUGUAC | m7a | Created | 0.013000 | 0.039000 |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86940041T>C | COSN5048743 | HX21T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86940229A>G | COSN7715165 | 8034061 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-130b-5p |
attgaAAAGAGaattccaa |
4 |
ACUCUUUC | m6b | Disrupted | 0.236000 | 0.152000 | No effect | |
hsa-miR-204-5p |
attgaAAAGGGAAttccaa |
6 |
UUCCCUUU | m8a | Created | 0.026000 | 0.044000 |
-0.010000 |
|
hsa-miR-211-5p |
attgaAAAGGGAAttccaa |
6 |
UUCCCUUU | m8a | Created | 0.047000 | 0.065000 |
-0.010000 |
|
hsa-miR-3938 |
attgaaaAGGGAATTccaa |
0 | AAUUCCCU | m8a | Created | no TS | -0.034000 |
-0.190000 |
|
hsa-miR-4753-3p |
attgaAAAGAGAAttccaa |
4 |
UUCUCUUU | m8a | Disrupted | 0.450000 | 0.325000 | No effect | |
hsa-miR-4755-5p |
attgaaAAGGGAAttccaa |
7 |
UUUCCCUU | m7b | Created | 0.151000 | 0.150000 | No effect | |
hsa-miR-5006-3p |
attgaaAAGGGAAttccaa |
7 |
UUUCCCUU | m7b | Created | 0.154000 | 0.153000 | No effect | |
hsa-miR-5571-5p |
attgaaaaGAGAATTccaa |
0 | CAAUUCUC | m7b | Disrupted | 0.143000 | 0.044000 | No effect | |
hsa-miR-623 |
attgaaAAGGGAattccaa |
7 |
AUCCCUUG | m6b | Created | 0.036000 | 0.041000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86940354G>A | COSN5544633 | RK101_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-548ao-5p |
taatacaaTACTTCTaagg |
0 | AGAAGUAA | m7a | Created | NA | NA |
-0.080000 |
|
hsa-miR-548ax |
taatacaaTACTTCTaagg |
0 | AGAAGUAA | m7a | Created | NA | NA | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86941104T>C | COSN5150337 | PD3945a | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3657 |
gaagatGGACACAatttgt |
0 | UGUGUCCC | m7a | Created | no TS | -0.064000 | No effect | |
hsa-miR-3713 |
gaagatGGATACaatttgt |
2 |
GGUAUCCG | m6b | Disrupted | -0.058000 | no TS |
0.120000 |
|
hsa-miR-4669 |
gaagatGGACACAatttgt |
0 | UGUGUCCG | m7a | Created | no TS | -0.062000 |
-0.550000 |
|
hsa-miR-599 |
gaagatgGACACAAtttgt |
4 |
GUUGUGUC | m7b | Created | 0.043000 | 0.032000 |
-0.060000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86941781G>T | COSN1969766 | RK046_C02 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-300 |
aatCTTGTATtgctctctg |
0 | UAUACAAG | m7b | (m6c->m7b) | 0.234000 | 0.304000 |
-0.010000 |
|
hsa-miR-381 |
aatCTTGTATtgctctctg |
0 | UAUACAAG | m7b | (m6c->m7b) | 0.234000 | 0.295000 |
-0.010000 |
|
hsa-miR-3942-5p |
aatcttgTATTGCTctctg |
2 |
AAGCAAUA | m7b | Created | -0.079000 | 0.012000 |
-3.020000 |
|
hsa-miR-4703-5p |
aatcttgTATTGCTctctg |
2 |
UAGCAAUA | m7b | Created | -0.060000 | -0.006000 |
-0.210000 |
|
hsa-miR-300 |
aatCTTGTATtgctctctg |
0 | UAUACAAG | m7b | (m6c->m7b) | 0.234 | 0.304 |
-0.01 |
|
hsa-miR-381 |
aatCTTGTATtgctctctg |
0 | UAUACAAG | m7b | (m6c->m7b) | 0.234 | 0.295 |
-0.01 |
|
hsa-miR-3942-5p |
aatcttgTATTGCTctctg |
0 | AAGCAAUA | m7b | Created | -0.079 | 0.012 |
-3.02 |
|
hsa-miR-4703-5p |
aatcttgTATTGCTctctg |
0 | UAGCAAUA | m7b | Created | -0.06 | -0.006 |
-0.21 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86942603A>G | COSN5544634 | RK131_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-606 |
tcattcaccGTAGTTTata |
2 |
AAACUACU | m7a | (m6a->m7a) | 0.002000 | 0.002000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86942755T>C | COSN8368946 | tumor_4166706 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3653 |
gtacgtTTCTTAattagct |
0 | CUAAGAAG | m6b | Disrupted | 0.427000 | 0.295000 |
0.960000 |
|
hsa-miR-3658 |
gtacgtTTCTTAAttagct |
8 |
UUUAAGAA | m7b | Disrupted | 0.467000 | 0.377000 |
0.020000 |
|
hsa-miR-4261 |
gtacGTTTCCTaattagct |
6 |
AGGAAACA | m7a | Created | -0.240000 | -0.240000 | No effect | |
hsa-miR-4496 |
gtacGTTTCCTaattagct |
5 |
GAGGAAAC | m7b | Created | 0.157000 | 0.256000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86942777A>G | COSN1282972 | HX10T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-155-3p |
ctacctggTGTAGGAGata |
1 |
CUCCUACA | m8a | Created | -0.013000 | -0.001000 | No effect | |
hsa-miR-337-3p |
ctacctggTATAGGAGata |
2 |
CUCCUAUA | m8a | Disrupted | 0.188000 | 0.089000 |
-0.010000 |
|
hsa-miR-4733-3p |
ctaCCTGGTGtaggagata |
0 | CCACCAGG | m7b | (m6c->m7b) | no TS | -0.086000 |
-0.050000 |
|
hsa-miR-155-3p |
ctacctggTGTAGGAGata |
0 | CUCCUACA | m8a | Created | -0.013 | -0.001 | No effect | |
hsa-miR-337-3p |
ctacctggTATAGGAGata |
0 | CUCCUAUA | m8a | Disrupted | 0.188 | 0.089 |
-0.01 |
|
hsa-miR-4733-3p |
ctaCCTGGTGtaggagata |
0 | CCACCAGG | m7b | (m6c->m7b) | no TS | -0.086 |
-0.05 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86943011G>C | ICGC_72A829B2-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1231 |
acacacaCAGACACacaca |
0 | GUGUCUGG | m7a | Disrupted | -0.18 | -0.18 |
0.01 |
|
hsa-miR-147a |
acacacacaCACACACaca |
0 | GUGUGUGG | m7a | (m6a->m7a) | -0.789 | -0.789 |
0.03 |
|
hsa-miR-4711-3p |
acacacacAGACACacaca |
0 | CGUGUCUU | m6b | Disrupted | -0.005 | -0.041 |
2.86 |
|
hsa-miR-632 |
acacacaCAGACACacaca |
0 | GUGUCUGC | m7a | Disrupted | 0.022 | 0.022 |
2.19 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86943804C>T | COSN6782712 | RK183_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4764-3p |
catcgGGAGTTAAgaaaca |
2 |
UUAACUCC | m8a | Created | -0.096000 | -0.052000 |
-0.140000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86943933G>A | COSN9726878 | C0004T | [kidney][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86944169C>A | COSN9726879 | C0059T | [kidney][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86944231G>T | COSN7715166 | 8016470 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4789-3p |
caggaccTATGTGTttggg |
9 |
CACACAUA | m7b | Created | -0.171000 | -0.046000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86944291A>T | COSN15132844 | PD3851a | [breast][NS][carcinoma][ductal_carcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4434 |
caccactgTTCTCCagctt |
0 | AGGAGAAG | m6b | Created | no TS | 0.085000 | No effect | |
hsa-miR-4516 |
caccactgTTCTCCagctt |
0 | GGGAGAAG | m6b | Created | no TS | 0.085000 | No effect | |
hsa-miR-4531 |
caccactgTTCTCCAgctt |
9 |
AUGGAGAA | m7b | Created | -0.035000 | 0.084000 | No effect | |
hsa-miR-4773 |
caccaCTGTTCTccagctt |
0 | CAGAACAG | m7b | Created | no TS | 0.115000 | No effect | |
hsa-miR-5703 |
caccactgTTCTCCagctt |
0 | AGGAGAAG | m6b | Created | no TS | 0.088000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86944404G>T | COSN15478654 | AOCS-095-1-4 | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-365a-3p |
attacctGGGCATTgtggg |
2 |
UAAUGCCC | m7b | Disrupted | -0.359000 | -0.331000 |
0.050000 |
|
hsa-miR-365b-3p |
attacctGGGCATTgtggg |
2 |
UAAUGCCC | m7b | Disrupted | -0.359000 | -0.331000 |
0.050000 |
|
hsa-miR-4726-3p |
attACCTGGGcattgtggg |
2 |
ACCCAGGU | m7b | (m7b->m6c) | -0.129000 | -0.052000 |
-1.200000 |
|
hsa-miR-365a-3p |
attacctGGGCATTgtggg |
2 |
UAAUGCCC | m7b | Disrupted | -0.359000 | -0.331000 |
0.050000 |
|
hsa-miR-365b-3p |
attacctGGGCATTgtggg |
2 |
UAAUGCCC | m7b | Disrupted | -0.359000 | -0.331000 |
0.050000 |
|
hsa-miR-4726-3p |
attACCTGGGcattgtggg |
2 |
ACCCAGGU | m7b | (m7b->m6c) | -0.129000 | -0.052000 |
-1.200000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86944417A>G | COSN5544635 | RK050_C | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-30a-3p |
aaatttCTGAAAaattacc |
9 |
CUUUCAGU | m6b | Disrupted | 0.367000 | 0.283000 | No effect | |
hsa-miR-30d-3p |
aaatttCTGAAAaattacc |
9 |
CUUUCAGU | m6b | Disrupted | 0.367000 | 0.283000 |
0.010000 |
|
hsa-miR-30e-3p |
aaatttCTGAAAaattacc |
9 |
CUUUCAGU | m6b | Disrupted | 0.371000 | 0.283000 | No effect | |
hsa-miR-3180-5p |
aaattTCTGGAAaattacc |
1 |
CUUCCAGA | m7b | Created | 0.058000 | 0.100000 |
-0.010000 |
|
hsa-miR-3942-3p |
aaattTCTGAAAaattacc |
3 |
UUUCAGAU | m7a | Disrupted | 0.135000 | 0.077000 |
0.010000 |
|
hsa-miR-520a-5p |
aaattTCTGGAaaattacc |
1 |
CUCCAGAG | m6b | Created | -0.136000 | -0.135000 |
-0.020000 |
|
hsa-miR-525-5p |
aaattTCTGGAaaattacc |
1 |
CUCCAGAG | m6b | Created | -0.136000 | -0.125000 |
-0.050000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945060T>A | COSN8929719 | SS6003320 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4282 |
aggttAAATTTTctatact |
2 |
UAAAAUUU | m7b | Disrupted | 1.507000 | 1.294000 |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945138T>C | COSN1969767 | RK004_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-128 |
tttttacCACTGTGgggtc |
11 |
UCACAGUG | m7b | Created | -0.011000 | 0.049000 |
-0.050000 |
|
hsa-miR-3681-3p |
tttttacCACTGTGgggtc |
11 |
ACACAGUG | m7b | Created | -0.029000 | 0.022000 |
-0.050000 |
|
hsa-miR-128 |
tttttacCACTGTGgggtc |
0 | UCACAGUG | m7b | Created | -0.011 | 0.049 |
-0.05 |
|
hsa-miR-3681-3p |
tttttacCACTGTGgggtc |
0 | ACACAGUG | m7b | Created | -0.029 | 0.022 |
-0.05 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945349G>T | cosmic_v64_1751963 | ccRCC | |||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-548at-5p |
catatatgcTAACTTTTta |
0 | AAAAGUUA | m8a | (m7a->m8a) | 0.293 | 0.443 |
-13.45 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945464T>C | COSN9576890 | AOCS-080-1-9 | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-548ae |
gagaAGTTTTTtagcttta |
4 |
CAAAAACU | m7b | Disrupted | 0.636000 | 0.537000 | No effect | |
hsa-miR-548ah-3p |
gagaAGTTTTTtagcttta |
4 |
CAAAAACU | m7b | Disrupted | 0.672000 | 0.573000 | No effect | |
hsa-miR-548aj-3p |
gagaAGTTTTTtagcttta |
4 |
UAAAAACU | m7b | Disrupted | 0.636000 | 0.537000 | No effect | |
hsa-miR-548am-3p |
gagaAGTTTTTtagcttta |
4 |
CAAAAACU | m7b | Disrupted | 0.672000 | 0.573000 | No effect | |
hsa-miR-548aq-3p |
gagaAGTTTTTtagcttta |
4 |
CAAAAACU | m7b | Disrupted | 0.636000 | 0.537000 | No effect | |
hsa-miR-548x-3p |
gagaAGTTTTTtagcttta |
4 |
UAAAAACU | m7b | Disrupted | 0.636000 | 0.537000 | No effect | |
hsa-miR-5582-3p |
gagAAGTTTTttagcttta |
2 |
UAAAACUU | m7b | (m7b->m6c) | 0.274000 | 0.136000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945484T>G | COSN8929720 | SS6003320 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4637 |
gtaaaaaAGTTAGTgtatt |
8 |
UACUAACU | m7b | Disrupted | -0.043000 | no TS |
0.300000 |
|
hsa-miR-4999-3p |
gtaaaaaaGGTAGTGtatt |
2 |
UCACUACC | m7b | Created | -0.026000 | -0.187000 |
-4.910000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945635C>A | COSN8929721 | SS6003317 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945711T>A | cosmic_v64_1751955 | ccRCC | |||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945787T>C | COSN8929722 | SS6003121 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1297 |
tggcttTACTTGAtttaat |
2 |
UUCAAGUA | m7b | Disrupted | 0.015000 | 0.072000 |
0.010000 |
|
hsa-miR-26a-5p |
tggcttTACTTGAtttaat |
2 |
UUCAAGUA | m7b | Disrupted | -0.006000 | 0.060000 |
0.020000 |
|
hsa-miR-26b-5p |
tggcttTACTTGAtttaat |
2 |
UUCAAGUA | m7b | Disrupted | 0.003000 | 0.060000 | No effect | |
hsa-miR-4465 |
tggcttTACTTGAtttaat |
2 |
CUCAAGUA | m7b | Disrupted | 0.025000 | 0.082000 |
0.010000 |
|
hsa-miR-551b-5p |
tggctttacTTGATTTaat |
8 |
GAAAUCAA | m7b | (m7b->m6b) | 0.411000 | 0.357000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86945961C>A | COSN15411904 | AOCS-167-16-X | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3145-3p |
ttgaaggaaAAATATCTgg |
2 |
AGAUAUUU | m8a | (m7a->m8a) | 0.028000 | 0.093000 | No effect | |
hsa-miR-4326 |
ttgaAGGAACAatatctgg |
0 | UGUUCCUC | m7a | Disrupted | -0.005000 | 0.035000 |
0.030000 |
|
hsa-miR-3145-3p |
ttgaaggaaAAATATCTgg |
2 |
AGAUAUUU | m8a | (m7a->m8a) | 0.028000 | 0.093000 | No effect | |
hsa-miR-4326 |
ttgaAGGAACAatatctgg |
0 | UGUUCCUC | m7a | Disrupted | -0.005000 | 0.035000 |
0.030000 |
|
hsa-miR-3145-3p |
ttgaaggaaAAATATCTgg |
2 |
AGAUAUUU | m8a | (m7a->m8a) | 0.028000 | 0.093000 | No effect | |
hsa-miR-4326 |
ttgaAGGAACAatatctgg |
0 | UGUUCCUC | m7a | Disrupted | -0.005000 | 0.035000 |
0.030000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86946139C>T | COSN1969768 | RK004_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1193 |
ctagcCCATCCaaatttga |
11 |
GGGAUGGU | m6b | Disrupted | -0.105000 | no TS | No effect | |
hsa-miR-432-3p |
ctagcCCATCCAaatttga |
10 |
CUGGAUGG | m7b | Disrupted | -0.196000 | no TS |
0.080000 |
|
hsa-miR-4790-3p |
ctagcCCATTCAaatttga |
1 |
UGAAUGGU | m7a | Created | -0.118000 | -0.175000 | No effect | |
hsa-miR-5004-3p |
ctagcccATCCAAatttga |
8 |
CUUGGAUU | m6b | Disrupted | -0.099000 | -0.092000 |
0.050000 |
|
hsa-miR-1193 |
ctagcCCATCCaaatttga |
0 | GGGAUGGU | m6b | Disrupted | -0.105 | no TS | No effect | |
hsa-miR-432-3p |
ctagcCCATCCAaatttga |
0 | CUGGAUGG | m7b | Disrupted | -0.196 | no TS |
0.08 |
|
hsa-miR-4790-3p |
ctagcCCATTCAaatttga |
0 | UGAAUGGU | m7a | Created | -0.118 | -0.175 | No effect | |
hsa-miR-5004-3p |
ctagcccATCCAAatttga |
0 | CUUGGAUU | m6b | Disrupted | -0.099 | -0.092 |
0.05 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86946358A>T | COSN9576892 | AOCS-135-8-X | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4251 |
ttacattgaTTCTCAGtaa |
18 |
CCUGAGAA | m7b | (m6b->m7b) | -0.058000 | -0.194000 |
-0.010000 |
|
hsa-miR-5186 |
ttacattgAATCTCagtaa |
9 |
AGAGAUUG | m6b | Disrupted | -0.059000 | no TS | No effect | |
hsa-miR-580 |
ttacattgATTCTCAgtaa |
0 | UUGAGAAU | m7b | Created | no TS | -0.076000 |
-0.070000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86946405A>C | COSN4822244 | tumor_4135350 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-5707 |
tcttaCAAACGTagctata |
0 | ACGUUUGA | m7a | Created | NA | NA | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86946526C>A | COSN1969769 | RK023_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-148a-5p |
tttaaAGAACTTgctctca |
20 |
AAAGUUCU | m7b | Disrupted | -0.013000 | 0.093000 | No effect | |
hsa-miR-5584-3p |
tttaAAGAACTtgctctca |
22 |
UAGUUCUU | m7b | Disrupted | -0.014000 | 0.081000 | No effect | |
hsa-miR-148a-5p |
tttaaAGAACTTgctctca |
0 | AAAGUUCU | m7b | Disrupted | -0.013 | 0.093 |
4.11 |
|
hsa-miR-5584-3p |
tttaAAGAACTtgctctca |
0 | UAGUUCUU | m7b | Disrupted | -0.014 | 0.081 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.86946604G>T | COSN5544636 | RK030_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1323 |
aaaaAGTTTTGtttagcat |
2 |
UCAAAACU | m7b | Created | 0.153000 | 0.017000 | No effect | |
hsa-miR-495 |
aaaaagtTTTGTTTagcat |
2 |
AAACAAAC | m7a | Created | 0.137000 | 0.137000 | No effect | |
hsa-miR-497-3p |
aaaaagttTGGTTTagcat |
0 | CAAACCAC | m6b | Disrupted | 0.092000 | 0.134000 | No effect | |
hsa-miR-548o-3p |
aaaaAGTTTTGtttagcat |
2 |
CCAAAACU | m7b | Created | 0.149000 | 0.023000 | No effect | |
hsa-miR-5582-3p |
aaaAAGTTTTgtttagcat |
2 |
UAAAACUU | m7b | (m6c->m7b) | 0.274000 | 0.203000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.86946635G>T | COSN6575780 | ICGC_MB76 | [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-376c |
gcTCTATGTTcatctattt |
8 |
AACAUAGA | m8a | (m7b->m8a) | -0.163000 | -0.190000 |
-0.070000 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
86938124 | rs192121161 | G | |||||||
A |
hsa-miR-3145-3p hsa-miR-580-5p |
1 1 |
AATATCAttaagt aatATCATTAagt |
Created Created |
N N |
-0.095 -0.064 |
|||
86938125 | rs115182530 | C | C |
hsa-miR-3145-3p |
2 |
AAATATCgttaag |
Disrupted |
N |
-0.072 |
T |
hsa-miR-16-2-3p hsa-miR-195-3p hsa-miR-338-5p |
1 1 2 |
aAATATTGttaag aAATATTGttaag aaATATTGTtaag |
Created Created Created |
N N N |
-0.105 -0.096 -0.117 |
|||
86938130 | rs147262877 | A | A |
hsa-miR-3145-3p hsa-miR-4446-5p |
2 2 |
tgggaAAATATCg tGGGAAAAtatcg |
Disrupted Disrupted |
N N |
-0.072 -0.104 |
C |
hsa-miR-190a-5p hsa-miR-190b hsa-miR-642b-5p |
2 2 2 |
tgggaACATATCg tgggaACATATCg tGGGAACAtatcg |
Created Created Created |
N N N |
-0.149 -0.158 -0.177 |
|||
86938567 | rs14416 | A | A |
hsa-miR-4728-3p hsa-miR-8075 |
0 |
aTCAGCATtgatc ATCAGCAttgatc |
Disrupted Disrupted |
N N |
-0.139 -0.111 |
T |
hsa-miR-320a hsa-miR-320b hsa-miR-320c hsa-miR-320d hsa-miR-330-3p hsa-miR-4429 |
14 14 14 14 17 14 |
atCAGCTTTgatc atCAGCTTTgatc atCAGCTTTgatc atCAGCTTTgatc atcaGCTTTGAtc atCAGCTTTgatc |
Created Created Created Created Created Created |
N N N N N N |
-0.093 -0.093 -0.093 -0.093 -0.025 -0.093 |
|||
86938666 | rs76771757 | C | C |
hsa-miR-383-5p hsa-miR-4772-5p |
7 7 |
gCTGATCAataaa gCTGATCAataaa |
Disrupted Disrupted |
N N |
-0.093 -0.094 |
G |
hsa-miR-664a-3p |
13 |
gctgATGAATAaa |
Created |
N |
0.044 |
|||
86938718 | rs74615560 | T | T |
hsa-miR-1323 hsa-miR-548o-3p |
8 8 |
catGTTTTGAtag catGTTTTGAtag |
Disrupted Disrupted |
N N |
0.012 0.008 |
C |
hsa-miR-2115-3p hsa-miR-361-5p hsa-miR-589-3p |
9 11 8 |
catgTTCTGATAg catgtTCTGATAg caTGTTCTGAtag |
Created Created Created |
N N N |
-0.107 -0.089 -0.181 |
|||
86939071 | rs191278188 | A | A |
hsa-miR-606 |
1 |
tcatGTAGTTAtt |
Disrupted |
N |
-0.018 |
G |
hsa-miR-6776-3p |
1 |
tcatGTGGTTAtt |
Created |
N |
-0.051 |
|||
86939201 | rs116104226 | T | C |
hsa-miR-516a-5p |
0 |
tgtaaTCGAGAAg |
Created |
N |
-0.096 |
T |
hsa-miR-4275 hsa-miR-513c-5p hsa-miR-514b-5p |
0 |
tGTAATTGAgaag tgtaaTTGAGAAg tgtaaTTGAGAAg |
Disrupted Disrupted Disrupted |
N N N |
0.09 0.049 0.046 |
|||
86939961 | rs143440980 | A | A |
hsa-miR-3606-3p hsa-miR-5010-3p hsa-miR-513a-3p hsa-miR-513c-3p hsa-miR-599 |
4 4 4 4 4 |
aacacAAATTTAt aACACAAAtttat aacacAAATTTAt aacacAAATTTAt aACACAAAtttat |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
0.206 0.025 0.203 0.203 0.043 |
86940210 | rs2232711 | T | T |
hsa-miR-300 hsa-miR-381-3p |
2 2 |
CTTGTATtctgaa CTTGTATtctgaa |
Disrupted Disrupted |
N N |
0.103 0.103 |
C |
hsa-miR-759 |
2 |
cttgtACTCTGAa |
Created |
N |
0.035 |
|||
86940216 | rs144668674 | - | C |
hsa-miR-300 hsa-miR-381-3p hsa-miR-624-3p |
2 2 1 |
caagacCTTGTAT caagacCTTGTAT caagACCTTGTAt |
Unknown Unknown Unknown |
N N N |
0.05 0.05 No Change |
- |
hsa-miR-1264 hsa-miR-6882-5p |
4 1 |
cAAGACTTgtat caaGACTTGTAt |
Unknown Unknown |
N N |
0.089 -0.011 |
|||
86941116 | rs193207763 | A | A |
hsa-miR-204-5p hsa-miR-211-5p hsa-miR-4755-5p hsa-miR-5006-3p hsa-miR-623 hsa-miR-6832-3p |
6 6 7 7 7 6 |
atttAAAGGGAAg atttAAAGGGAAg atttaAAGGGAAg atttaAAGGGAAg atttaAAGGGAAg atttAAAGGGAag |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
-0.035 -0.014 -0.026 -0.026 -0.008 0.016 |
G |
hsa-miR-3127-3p hsa-miR-6756-3p hsa-miR-6826-3p |
6 6 7 |
atttAAGGGGAag atttAAGGGGAag atttaAGGGGAAg |
Created Created Created |
N N N |
-0.045 -0.052 -0.056 |
|||
86941262 | rs78993102 | G | G |
hsa-miR-551b-5p |
10 |
acaaTTGATTTAa |
Disrupted |
N |
0.143 |
T |
hsa-miR-5692a |
12 |
acaatTTATTTAa |
Created |
N |
0.173 |
|||
86941980 | rs192031605 | C | |||||||
T |
hsa-miR-1250-3p hsa-miR-153-5p hsa-miR-181a-5p hsa-miR-181b-5p hsa-miR-181c-5p hsa-miR-181d-5p hsa-miR-4262 hsa-miR-5696 hsa-miR-579-3p hsa-miR-664a-3p hsa-miR-664b-3p |
1 1 1 1 1 1 1 1 1 1 1 |
caAAAATGAatgt cAAAAATGAatgt caaaaaTGAATGT caaaaaTGAATGT caaaaaTGAATGT caaaaaTGAATGT caaaaaTGAATGT caaAAATGAAtgt caaAAATGAAtgt caaaAATGAATgt caaAAATGAAtgt |
Created Created Created Created Created Created Created Created Created Created Created |
N N N N N N N N N N N |
0.164 0.22 0.002 0.002 0.011 -0.008 0.011 0.133 0.13 0.111 0.144 |
|||
86941999 | rs189704743 | T | T |
hsa-miR-488-3p hsa-miR-548at-5p hsa-miR-653-5p |
1 0 2 |
ctaaCTTTCAAca cTAACTTTcaaca ctaactTTCAACA |
Disrupted Disrupted Disrupted |
N N N |
0.082 0.137 0.027 |
G |
hsa-miR-4645-3p |
0 |
ctaACTGTCAaca |
Created |
N |
0.001 |
|||
86942673 | rs138843924 | T | T |
hsa-miR-4496 hsa-miR-548a-3p hsa-miR-548ar-3p hsa-miR-548az-3p hsa-miR-548e-3p hsa-miR-548f-3p hsa-miR-8065 |
1 1 1 1 1 1 0 |
cagtTTTCCTAca CAGTTTTcctaca CAGTTTTcctaca CAGTTTTcctaca CAGTTTTcctaca CAGTTTTcctaca cagttTTCCTACA |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N |
0.092 0.08 0.099 0.099 0.099 0.089 -0.112 |
C |
hsa-miR-135b-3p hsa-miR-4738-3p hsa-miR-5584-5p hsa-miR-6750-5p hsa-miR-6822-5p |
0 |
cagtttCCCTACA CAGTTTCcctaca cagTTTCCCTAca cagtTTCCCTAca cagtTTCCCTAca |
Created Created Created Created Created |
N N N N N |
-0.107 0.016 0.069 0.016 0.006 |
|||
86942721 | rs13087378 | A | A |
hsa-miR-205-5p hsa-miR-6868-3p |
7 7 |
ttcTGAAGGAaaa ttctGAAGGAAaa |
Disrupted Disrupted |
N N |
-0.012 0.012 |
G |
hsa-miR-4446-5p hsa-miR-4755-5p hsa-miR-5006-3p hsa-miR-642a-5p |
7 8 8 7 |
ttctgAGGGAAAA ttctgAGGGAAAa ttctgAGGGAAAa ttctGAGGGAAaa |
Created Created Created Created |
N N N N |
0.052 -0.003 No Change -0.063 |
|||
86942734 | rs9834197 | G | |||||||
G |
hsa-miR-425-5p hsa-miR-603 hsa-miR-642a-3p hsa-miR-642b-3p |
0 |
tttagtGTGTCAT tttAGTGTGTcat tttagTGTGTCAt tttagTGTGTCAt |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.042 -0.022 -0.019 -0.019 |
|||
86943011 | rs201753357 | C | G |
hsa-miR-4711-3p |
0 |
cacacAGACACAc |
Created |
N |
0.036 |
C |
hsa-miR-6867-5p |
0 |
CACACACAcacac |
Disrupted |
N |
0.244 |
|||
86943012 | rs67714439 | - | CA |
hsa-miR-4711-3p hsa-miR-6867-5p |
0 |
cacacacAGACACAc CACACACAgacacac |
Unknown Unknown |
N N |
No Change 0.087 |
- | |||||||||
86943013 | rs10609628 | - | AC |
hsa-miR-6867-5p |
2 |
aCACACACAgacaca |
Unknown |
N |
0.087 |
- |
hsa-miR-4711-3p |
0 |
acacacAGACACA |
Unknown |
N |
No Change |
|||
86943021 | rs62257343 | C | C |
hsa-miR-6867-5p |
1 |
CACACACAcacac |
Disrupted |
N |
0.128 |
G |
hsa-miR-4711-3p |
3 |
cacacAGACACAc |
Created |
N |
0.038 |
|||
86943248 | rs139135645 | A | G |
hsa-miR-614 |
0 |
agtGGCGTTAagt |
Created |
N |
-0.077 |
A |
hsa-miR-155-5p hsa-miR-365a-3p hsa-miR-365b-3p hsa-miR-4252 |
0 |
agtgGCATTAAgt agtGGCATTAagt agtGGCATTAagt AGTGGCAttaagt |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
0.091 0.035 0.035 -0.043 |
|||
86943884 | rs144669218 | A | A |
hsa-miR-3145-3p |
2 |
ttctAAATATCtg |
Disrupted |
N |
0.1 |
G |
hsa-miR-374c-3p |
2 |
ttCTAAGTAtctg |
Created |
N |
0.031 |
|||
86943948 | rs186163643 | C | C |
hsa-miR-122-5p hsa-miR-504-3p hsa-miR-6880-5p |
3 3 3 |
acCACTCCAcctt acCACTCCAcctt accaCTCCACCtt |
Disrupted Disrupted Disrupted |
N N N |
-0.025 -0.016 -0.083 |
G |
hsa-miR-143-5p hsa-miR-18a-5p hsa-miR-18b-5p hsa-miR-4735-3p hsa-miR-6499-3p |
3 3 3 3 3 |
accACTGCACctt accactGCACCTT accactGCACCTT accactGCACCTT acCACTGCAcctt |
Created Created Created Created Created |
N N N N N |
-0.004 -0.09 -0.09 -0.09 -0.012 |
|||
86944885 | rs188452008 | C | C |
hsa-miR-1827 |
3 |
tattTGCCTCAtc |
Disrupted |
N |
0.012 |
A |
hsa-miR-3671 hsa-miR-5702 hsa-miR-937-5p |
3 3 3 |
TATTTGActcatc tattTGACTCAtc tattTGACTCAtc |
Created Created Created |
N N N |
0.163 0.017 -0.008 |
|||
86945628 | rs192560770 | G | G |
hsa-miR-1200 hsa-miR-4324 hsa-miR-544b |
5 1 5 |
tCTCAGGAtctaa TCTCAGGAtctaa tCTCAGGAtctaa |
Disrupted Disrupted Disrupted |
N N N |
-0.068 -0.067 -0.02 |
A |
hsa-miR-376a-5p hsa-miR-4251 hsa-miR-4303 hsa-miR-4329 hsa-miR-4760-5p hsa-miR-6761-5p hsa-miR-8061 |
5 1 5 1 6 1 6 |
tctcaGAATCTAA TCTCAGAatctaa tCTCAGAAtctaa TCTCAGAatctaa tctcagAATCTAA TCTCAGAatctaa tctcagAATCTAA |
Created Created Created Created Created Created Created |
N N N N N N N |
-0.036 -0.01 No Change -0.016 0.05 -0.036 0.042 |
|||
86945974 | rs1436639 | G | G |
hsa-miR-105-5p hsa-miR-365a-3p hsa-miR-365b-3p hsa-miR-6886-3p hsa-miR-7853-5p hsa-miR-938 |
2 0 0 0 2 0 |
tgaaggGCATTTG tgaaGGGCATTtg tgaaGGGCATTtg tGAAGGGCAtttg tgaaggGCATTTG tgAAGGGCAtttg |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
-0.049 -0.15 -0.15 -0.231 -0.056 -0.108 |
T |
hsa-miR-6759-3p |
0 |
tgAAGGTCAtttg |
Created |
N |
-0.05 |
|||
86946109 | rs149885454 | A | A |
hsa-miR-410-3p hsa-miR-568 |
2 4 |
gGTTATATAcaac ggttaTATACAAc |
Disrupted Disrupted |
N N |
0.076 0.041 |
G |
hsa-let-7a-2-3p hsa-let-7c-3p hsa-let-7g-3p hsa-miR-3613-5p hsa-miR-493-5p |
4 4 4 4 4 |
ggttaTGTACAAc ggttaTGTACAAc ggttaTGTACAAc ggttatGTACAAC ggttATGTACAAc |
Created Created Created Created Created |
N N N N N |
No Change 0.006 -0.004 -0.137 -0.07 |
|||
86946371 | rs189973672 | G | G |
hsa-miR-548ac hsa-miR-548ae hsa-miR-548ah-3p hsa-miR-548aj-3p hsa-miR-548am-3p hsa-miR-548aq-3p hsa-miR-548d-3p hsa-miR-548h-3p hsa-miR-548j-3p hsa-miR-548x-3p hsa-miR-548z |
5 5 5 5 5 5 5 5 5 5 5 |
agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA agtattGTTTTTA |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N N N N |
0.074 0.077 0.077 0.077 0.077 0.077 0.08 0.074 0.07 0.077 0.074 |