SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_012474
Gene Symbol:	UCK2
Description:	Homo sapiens uridine-cytidine kinase 2 (UCK2), mRNA.
Gene Location:	chr1(+):165796731-165880855
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Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.165909107T>A			10_4802		6408		Breast cancer
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.165910180G>T			COSN7182362		8033691		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-188-5p	aacaaggAAGGGATGgaag	0	CAUCCCUU	m8a	Disrupted	0.092000	no TS	No effect
hsa-miR-3667-3p	aacaAGGAAGGgatggaag	2	ACCUUCCU	m7b	Disrupted	-0.155000	-0.174000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr1:g.165911515T>C			COSN1091567		HX13T		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-4690-5p	ttaagatGCCTGCTCctct	4	GAGCAGGC	m8a	Created	-0.195000	-0.459000	-0.030000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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