| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_014729 |
|---|---|
| Gene Symbol: | TOX |
| Description: | Homo sapiens thymocyte selection-associated high mobility group box (TOX), mRNA. |
| Gene Location: | chr8(-):59717976-60031767 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.58805485A>G | COSN4881523 | tumor_4104893 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1256 |
aaattCAATGCCaaataca |
0 | AGGCAUUG | m7b | Created | no TS | -0.493000 |
-3.100000 |
| hsa-miR-1271-5p |
aaattcaaTGCCAAataca |
20 |
CUUGGCAC | m6b | Created | -0.089000 | -0.259000 |
-3.050000 |
| hsa-miR-4642 |
aaattcaATGCCAaataca |
0 | AUGGCAUC | m6b | Created | no TS | -0.165000 |
-14.290000 |
| hsa-miR-5002-5p |
aaattcaatACCAAATaca |
9 |
AAUUUGGU | m7b | (m7b->m6b) | -0.313000 | -0.090000 | No effect |
| hsa-miR-5681b |
aaattCAATACCaaataca |
0 | AGGUAUUG | m7b | Disrupted | -0.422000 | no TS |
-0.080000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.58806217T>C | COSN2282407 | RK021_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3622a-5p |
gctgtctttCGTGCCTcta |
0 | CAGGCACG | m7b | (m6b->m7b) | no TS | -0.220000 |
-2.780000 |
| hsa-miR-5582-5p |
gctgtctttTGTGCCTcta |
0 | UAGGCACA | m7b | (m7b->m6b) | -0.178000 | no TS |
1.210000 |
| hsa-miR-3622a-5p |
gctgtctttCGTGCCTcta |
0 | CAGGCACG | m7b | (m6b->m7b) | no TS | -0.22 |
-2.78 |
| hsa-miR-5582-5p |
gctgtctttTGTGCCTcta |
0 | UAGGCACA | m7b | (m7b->m6b) | -0.178 | no TS |
1.21 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.58806838T>A | COSN8093242 | 8035543 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-587 |
atcttttttTATGGAAcct |
0 | UUUCCAUA | m7b | (m7b->m6b) | -0.042000 | no TS |
1.060000 |
| hsa-miR-885-5p |
atctttttTAATGGAacct |
17 |
UCCAUUAC | m7a | Created | -0.151000 | -0.161000 |
-0.100000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.58807514C>T | COSN1366531 | HCC87T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4427 |
aatttggacTATTCAGAtt |
16 |
UCUGAAUA | m8a | (m7a->m8a) | -0.062000 | -0.196000 |
-2.030000 |
| hsa-miR-4790-3p |
aatttggACCATTCAgatt |
15 |
UGAAUGGU | m8a | Disrupted | -0.280000 | no TS |
1.460000 |
| hsa-miR-5585-3p |
aatttggaCTATTCAGatt |
0 | CUGAAUAG | m8a | Created | no TS | -0.120000 |
-0.340000 |
| hsa-miR-4427 |
aatttggacTATTCAGAtt |
0 | UCUGAAUA | m8a | (m7a->m8a) | -0.062 | -0.196 |
-2.03 |
| hsa-miR-4790-3p |
aatttggACCATTCAgatt |
0 | UGAAUGGU | m8a | Disrupted | -0.28 | no TS |
1.46 |
| hsa-miR-5585-3p |
aatttggaCTATTCAGatt |
0 | CUGAAUAG | m8a | Created | no TS | -0.12 |
-0.34 |