SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001204458 |
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Gene Symbol: | TNFRSF19 |
Description: | Homo sapiens tumor necrosis factor receptor superfamily, member 19 (TNFRSF19), transcript variant 3, mRNA. |
Gene Location: | chr13(+):24153498-24250244 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr13:g.23673437T>C | COSN7396286 | 8066852 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-495 |
gtactccTTTGTTaggctt |
2 |
AAACAAAC | m6b | Disrupted | 0.044000 | no TS |
0.020000 |
hsa-miR-7-1-3p |
gtactccTTTGTTaggctt |
2 |
CAACAAAU | m6b | Disrupted | 0.120000 | 0.082000 |
0.140000 |
hsa-miR-7-2-3p |
gtactccTTTGTTaggctt |
2 |
CAACAAAU | m6b | Disrupted | 0.111000 | 0.073000 |
1.250000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr13:g.23675917G>T | COSN1603863 | RK159_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |