SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001127266 |
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Gene Symbol: | TMEM129 |
Description: | Homo sapiens transmembrane protein 129 (TMEM129), transcript variant 1, mRNA. |
Gene Location: | chr4(-):1717678-1723084 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.1716360C>A | COSN6813404 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1268a |
gatgCACGCCCcctgtggt |
2 |
CGGGCGUG | m7b | Disrupted | -0.149000 | no TS |
0.010000 |
hsa-miR-1268b |
gatgCACGCCCcctgtggt |
2 |
CGGGCGUG | m7b | Disrupted | -0.168000 | no TS | No effect |
hsa-miR-4488 |
gatgcaCGCCCCCTgtggt |
1 |
AGGGGGCG | m8a | Disrupted | -0.242000 | no TS | No effect |
hsa-miR-4697-5p |
gatgcaCGCCCCCTgtggt |
1 |
AGGGGGCG | m8a | Disrupted | -0.232000 | no TS |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.1716875C>G | COSN9007076 | 8051710 | [pancreas][NS][carcinoid-endocrine_tumour][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |