SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_030956 |
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Gene Symbol: | TLR10 |
Description: | Homo sapiens toll-like receptor 10 (TLR10), transcript variant 2, mRNA. |
Gene Location: | chr4(-):38773859-38784611 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.38772449C>G | ICGC_9B5F36E8-2A78-11E2-8335-12FD496BB9B8 | CPCG_0102_Pr_P_P2 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-19a-5p |
ggtGCAAAACTaattgtgg |
0 | AGUUUUGC | m8a | Disrupted | -0.155 | no TS |
2.55 |
hsa-miR-19b-1-5p |
ggtGCAAAACTaattgtgg |
0 | AGUUUUGC | m8a | Disrupted | -0.155 | no TS |
1.08 |
hsa-miR-19b-2-5p |
ggtGCAAAACTaattgtgg |
0 | AGUUUUGC | m8a | Disrupted | -0.155 | no TS |
0.45 |
hsa-miR-4275 |
ggtgcaaaaGTAATTGtgg |
0 | CCAAUUAC | m7b | (m6b->m7b) | no TS | -0.131 |
-0.09 |
hsa-miR-5003-3p |
ggtgcAAAAGTAattgtgg |
0 | UACUUUUC | m7a | Created | no TS | 0.016 |
-1.319 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr4:g.38772632A>G | COSN7489918 | 8016470 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |