SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_022065
Gene Symbol: THADA
Description: Homo sapiens thyroid adenoma associated (THADA), transcript variant 3, mRNA.
Gene Location: chr2(-):43457974-43823185
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.43230845G>C COSN5504255 RK125_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-149-3p cccattcatCCCTCCCcta
0 AGGGAGGG m7b (m6b->m7b) no TS -0.345000 -6.890000
hsa-miR-3612 cccattcaTGCCTCCccta
0 AGGAGGCA m7b Disrupted -0.275000 no TS 3.520000
hsa-miR-4728-5p cccattcatCCCTCCCcta
0 UGGGAGGG m7b (m6b->m7b) no TS -0.326000 -7.010000
hsa-miR-5187-5p cccatTCATCCCtccccta
0 UGGGAUGA m7b Created no TS -0.274000 -0.720000
hsa-miR-650 cccattcaTGCCTCCccta
0 AGGAGGCA m7b Disrupted -0.257000 no TS 0.800000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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