| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_030965 |
|---|---|
| Gene Symbol: | ST6GALNAC5 |
| Description: | Homo sapiens ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 (ST6GALNAC5), mRNA. |
| Gene Location: | chr1(+):77333185-77529737 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.77063617G>C | COSN8638743 | 381_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-539-5p |
ataaccTTTCTCatctgtt |
0 | GGAGAAAU | m6b | Created | no TS | -0.023000 |
-0.870000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.77063965A>G | COSN8144850 | PCSI_0083_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-26a-1-3p |
aaaaAGAATAGcgatgaca |
5 |
CCUAUUCU | m7b | Disrupted | -0.200000 | no TS |
0.220000 |
| hsa-miR-26a-2-3p |
aaaaAGAATAGcgatgaca |
5 |
CCUAUUCU | m7b | Disrupted | -0.200000 | no TS |
0.212000 |