SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_004509
Gene Symbol: SP110
Description: Homo sapiens SP110 nuclear body protein (SP110), transcript variant d, mRNA.
Gene Location: chr2(-):231033644-231084827
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.230169038G>T COSN1234991 HCC89T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4432 agtGAGTCTTggatgtaat
0 AAAGACUC m7b (m6c->m7b) no TS -0.140000 -1.110000
hsa-miR-4432 agtGAGTCTTggatgtaat
0 AAAGACUC m7b (m6c->m7b) no TS -0.140000 -1.110000
hsa-miR-4432 agtGAGTCTTggatgtaat
0 AAAGACUC m7b (m6c->m7b) no TS -0.14 -1.11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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