SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_003108
Gene Symbol:	SOX11
Description:	Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA.
Gene Location:	chr2(+):5832798-5841517
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694134A>G			ICGC_6E0FD602-2A78-11E2-96E7-04FD496BB9B8		CPCG_0102_Pr_P_P1		ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-136-3p	gatgatgatGATGATGatg	0	CAUCAUCG	m7a	(m6b->m7a)	-0.234	-0.103	-0.78

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694150G>A			COSN1240636		HCC64T		[liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694174G>T			COSN1848008		RK170_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3162-3p	gcggtGGTAGGGtggaggg	6	UCCCUACC	m7b	Disrupted	-0.244000	no TS	7.550000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694175G>T			COSN1848009		RK170_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3162-3p	cggtGGTAGGGtggagggg	6	UCCCUACC	m7b	Disrupted	-0.244000	no TS	7.550000
hsa-miR-4999-3p	cggtGGTAGTGtggagggg	0	UCACUACC	m7b	Created	no TS	-0.167000	-1.710000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694366T>A			COSN5030683		HX30T		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-508-5p	agtCTGGAGTtgtgattat	6	UACUCCAG	m7b	(m7b->m6b)	-0.248000	-0.045000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694500G>T			COSN8609370		J10_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5694501C>A			COSN1240637		HCC97T		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695179C>A			COSN8609371		J10_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-106a-3p	aaaataatCATTGCAtcta	0	CUGCAAUG	m7b	Created	-0.248000	-0.353000	No effect
hsa-miR-3159	aaaaTAATCCTtgcatcta	16	UAGGAUUA	m7b	Disrupted	-0.047000	no TS	No effect
hsa-miR-4708-3p	aaaataatCCTTGCatcta	18	AGCAAGGC	m6b	Disrupted	-0.095000	no TS	-0.290000
hsa-miR-541-5p	aaaatAATCCTTgcatcta	17	AAAGGAUU	m7b	Disrupted	-0.012000	no TS	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695234G>T			COSN6188042		RK200_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3171	ttttgTACATCTatagtag	0	AGAUGUAU	m7a	Created	NA	NA	-0.140000
hsa-miR-4718	ttttGTACAGCTatagtag	18	AGCUGUAC	m8a	Disrupted	-0.200000	no TS	0.270000
hsa-miR-576-3p	ttttgtACATCTatagtag	0	AAGAUGUG	m6b	Created	no TS	-0.022000	-0.080000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695352T>C			COSN5507354		RK101_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-142-5p	agtaggACTTTATGtatct	18	CAUAAAGU	m8a	Disrupted	0.371000	0.224000	0.020000
hsa-miR-376c	agtaggacTCTATGTatct	7	AACAUAGA	m7b	Created	-0.093000	-0.016000	No effect
hsa-miR-5590-3p	agtaggACTTTATgtatct	18	AAUAAAGU	m7b	Disrupted	0.320000	0.201000	0.140000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695721C>T			COSN7077566		8036161		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-937	tgttgtgtGCGCGGATgag	2	AUCCGCGC	m8a	Disrupted	-0.344000	-0.159000	0.340000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695753T>C			COSN8609372		304_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3668	agagaatTCTACATTtagg	0	AAUGUAGA	m8a	Disrupted	0.026000	no TS	0.050000
hsa-miR-4491	agagaatTCCACATTtagg	0	AAUGUGGA	m8a	Created	no TS	-0.001000	-0.020000
hsa-miR-4657	agagaatTCCACATTtagg	0	AAUGUGGA	m8a	Created	no TS	-0.029000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695821T>A			COSN7077567		8058336		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-4999-3p	tccgctaGTAGTGAaagac	0	UCACUACC	m7a	Created	no TS	0.020000	No effect
hsa-miR-5003-5p	tccgctaGTTGTGAaagac	1	UCACAACA	m7a	Disrupted	0.095000	0.036000	No effect
hsa-miR-513b	tccgctagTTGTGAAagac	3	UUCACAAG	m7a	Disrupted	0.177000	0.076000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695938G>T			COSN8609373		1953_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3194-5p	catcctGGCTGGCgggctg	0	GGCCAGCC	m7b	Created	no TS	-0.001000	-2.380000
hsa-miR-4258	catccTGGCGGGcgggctg	0	CCCCGCCA	m7b	Disrupted	-0.078000	-0.091000	No effect
hsa-miR-4707-3p	catcctGGCGGGCgggctg	2	AGCCCGCC	m7b	Disrupted	-0.114000	-0.124000	-0.070000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5695971G>C			COSN8609374		J76_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1470	agctggccgCGGAGGGgcg	1	GCCCUCCG	m7b	(m6c->m7b)	-0.353000	-0.247000	No effect
hsa-miR-4707-5p	agctgGCCGGGGaggggcg	1	GCCCCGGC	m7b	Disrupted	-0.368000	-0.240000	-0.020000
hsa-miR-5587-3p	agctggCCGGGGaggggcg	0	GCCCCGGG	m6b	Disrupted	-0.353000	-0.319000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5696561A>G			COSN15188988		SM-4AX86		[oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5696858C>T			COSN7077575		8034291		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1247-3p	gaatcagctTCCCGGGGcc	2	CCCCGGGA	m8a	(m7b->m8a)	0.023000	0.009000	-0.110000
hsa-miR-3160-3p	gaaTCAGCTCcccggggcc	2	AGAGCUGA	m7b	(m7b->m6b)	0.107000	no TS	0.010000
hsa-miR-4300	gaatcAGCTCCCcggggcc	2	UGGGAGCU	m7b	Disrupted	0.160000	0.056000	No effect
hsa-miR-4532	gaatcagctCCCCGGGGcc	2	CCCCGGGG	m8a	(m8a->m7b)	-0.119000	-0.073000	0.540000
hsa-miR-5591-5p	gaatcAGCTCCCcggggcc	2	UGGGAGCU	m7b	Disrupted	0.114000	0.028000	No effect
hsa-miR-920	gaatcAGCTCCCCggggcc	2	GGGGAGCU	m8a	Disrupted	0.113000	0.037000	No effect
hsa-miR-939	gaatcaGCTCCCCggggcc	2	UGGGGAGC	m7b	Disrupted	-0.025000	-0.055000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697350C>T			COSN15269685		SM-4B295		[oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-147b	tggaagcgtCCGCACAgta	2	GUGUGCGG	m7b	(m7b->m6c)	-0.135000	no TS	3.460000
hsa-miR-4754	tggaagcGTCCGCAcagta	2	AUGCGGAC	m7b	Disrupted	-0.079000	no TS	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697533C>A			COSN5030684		HX31T		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1915-3p	agcccccacCCCTGGGatg	8	CCCCAGGG	m7b	(m7b->m6c)	0.049000	0.089000	0.500000
hsa-miR-3934	agcccccACACCTGggatg	12	UCAGGUGU	m7b	Created	-0.099000	0.031000	-1.380000
hsa-miR-4447	agCCCCCACCcctgggatg	0	GGUGGGGG	m8a	(m8a->m7a)	0.058000	-0.007000	-0.600000
hsa-miR-4472	agCCCCCACCcctgggatg	0	GGUGGGGG	m8a	(m8a->m7a)	0.058000	-0.007000	No effect
hsa-miR-4651	agcccCCACCCCtgggatg	6	CGGGGUGG	m7b	Disrupted	-0.133000	-0.198000	0.010000
hsa-miR-4685-5p	agcccccacCCCTGGGatg	0	CCCAGGGC	m7a	(m7a->m6b)	NA	NA	2.300000
hsa-miR-4726-3p	agcccccacACCTGGGatg	0	ACCCAGGU	m7b	(m6c->m7b)	0.086000	0.080000	No effect
hsa-miR-608	agcccCCACCCCTgggatg	6	AGGGGUGG	m8a	Disrupted	-0.170000	-0.197000	0.920000
hsa-miR-92a-2-5p	agcCCCCACCCctgggatg	0	GGGUGGGG	m8a	Disrupted	0.028000	-0.058000	0.010000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697645G>T			COSN8609375		824_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1248	aaAAGAAGGTgctgatggc	2	ACCUUCUU	m8a	(m7a->m8a)	0.079000	0.052000	-0.710000
hsa-miR-3065-3p	aaaagaaGGTGCTGAtggc	0	UCAGCACC	m8a	Created	0.098000	-0.013000	-0.010000
hsa-miR-3127-3p	aaaaGAAGGGGctgatggc	10	UCCCCUUC	m7b	Disrupted	-0.077000	-0.012000	No effect
hsa-miR-4323	aaaagaaGGGGCTGatggc	2	CAGCCCCA	m7a	Disrupted	0.035000	0.035000	0.010000
hsa-miR-4690-3p	aaaagaagGGGCTGatggc	7	GCAGCCCA	m6b	Disrupted	-0.045000	no TS	0.010000
hsa-miR-5685	aaaagaagGGGCTGatggc	7	ACAGCCCA	m6b	Disrupted	-0.048000	no TS	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697754T>C			9_82983		CRC-8-Tumor		Colorectal adenocarcinoma
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3646	tggtacaTTCATTTTagcc	0	AAAAUGAA	m8a	Created	no TS	0.158	No effect
hsa-miR-3662	tggtacatTCATTTTagcc	0	GAAAAUGA	m7b	Created	0.352	0.637	-0.03

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697810G>CC			cosmic_v64_1870279		NA		[upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1226-3p	gctccgtGCTGGTGAttttat	9	UCACCAGC	m8a	Disrupted	-0.137000	-0.073000	0.030000
hsa-miR-4733-3p	gctccgtgCTGGTGattttat	9	CCACCAGG	m6b	Disrupted	-0.043000	-0.047000	0.080000
hsa-miR-634	gctccgTGCTGGTgattttat	13	AACCAGCA	m7b	Disrupted	0.028000	no TS	0.070000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697838C>T			COSN10003764		C0086T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-103a-3p	cctcTGCTGCagttccgaa	11	AGCAGCAU	m6b	Disrupted	0.007000	0.000000	0.900000
hsa-miR-107	cctcTGCTGCagttccgaa	11	AGCAGCAU	m6b	Disrupted	0.007000	0.000000	2.100000
hsa-miR-1184	cctctGCTGCAGttccgaa	0	CCUGCAGC	m7b	Disrupted	-0.114000	-0.111000	No effect
hsa-miR-214-3p	cctCTGCTGTagttccgaa	16	ACAGCAGG	m7a	(m6a->m7a)	-0.054000	-0.054000	No effect
hsa-miR-3120-3p	cctcTGCTGTagttccgaa	0	CACAGCAA	m6b	Created	-0.440000	-0.379000	-1.230000
hsa-miR-4418	cctctgCTGCAGTtccgaa	9	CACUGCAG	m7b	Disrupted	0.068000	0.003000	No effect
hsa-miR-509-3-5p	cctctgCTGCAGTtccgaa	9	UACUGCAG	m7b	Disrupted	0.039000	-0.007000	-0.030000
hsa-miR-509-5p	cctctgCTGCAGTtccgaa	9	UACUGCAG	m7b	Disrupted	0.049000	0.003000	-0.060000
hsa-miR-761	cctCTGCTGCagttccgaa	16	GCAGCAGG	m7a	(m7a->m6a)	-0.082000	-0.082000	-0.330000
hsa-miR-922	ccTCTGCTGCagttccgaa	9	GCAGCAGA	m8a	(m8a->m7a)	0.036000	0.009000	-0.120000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697875A>C			COSN8609376		951_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697944T>C			COSN1848018		RK031_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-198	agatgaatcCTGGACattt	0	GGUCCAGA	m6b	Created	no TS	-0.045000	No effect
hsa-miR-665	agatgaaTCCTGGacattt	1	ACCAGGAG	m6b	Created	0.305000	0.312000	-0.030000
hsa-miR-198	agatgaatcCTGGACattt	0	GGUCCAGA	m6b	Created	no TS	-0.045	No effect
hsa-miR-665	agatgaaTCCTGGacattt	0	ACCAGGAG	m6b	Created	0.305	0.312	-0.03

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5697955C>T			COSN1848019		RK001_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-140-3p	ggacattttCTGTGGTgag	0	UACCACAG	m7b	(m7b->m6c)	-0.050000	no TS	No effect
hsa-miR-3613-3p	ggacaTTTTTTGTggtgag	0	ACAAAAAA	m8a	Created	0.885000	1.080000	No effect
hsa-miR-140-3p	ggacattttCTGTGGTgag	0	UACCACAG	m7b	(m7b->m6c)	-0.05	no TS	No effect
hsa-miR-3613-3p	ggacaTTTTTTGTggtgag	0	ACAAAAAA	m8a	Created	0.885	1.08	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5698299A>C			COSN8893960		SS6003317		[oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5698639G>A			COSN1848023		RK180_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1178	cagacacTGAGCAAattat	0	UUGCUCAC	m7a	Created	-0.024000	-0.053000	-0.920000
hsa-miR-199a-5p	cagACACTGGGcaaattat	3	CCCAGUGU	m8a	Disrupted	-0.029000	-0.032000	0.030000
hsa-miR-199b-5p	cagACACTGGGcaaattat	3	CCCAGUGU	m8a	Disrupted	-0.022000	-0.025000	0.510000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5698906T>C			COSN1848024		RK194_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-10a-3p	cttcaGAATTTaagtgact	7	CAAAUUCG	m6b	Disrupted	0.239000	0.124000	No effect
hsa-miR-374c-3p	cttcagaatCTAAGTGact	0	CACUUAGC	m7a	(m6b->m7a)	NA	NA	-0.010000
hsa-miR-376a-5p	cttcaGAATCTAagtgact	1	GUAGAUUC	m7b	Created	0.132000	0.192000	-0.030000
hsa-miR-4760-5p	cttcagAATCTAAgtgact	1	UUUAGAUU	m7b	Created	0.318000	0.414000	-0.020000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5698918T>G			COSN14527574		8034061		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3926	agtgacTTTGGCCcaagga	3	UGGCCAAA	m7b	Created	0.037000	0.043000	No effect
hsa-miR-4640-5p	agtgacttTGGCCCAagga	0	UGGGCCAG	m7a	Created	no TS	-0.077000	No effect
hsa-miR-4726-5p	agtgacttTGGCCCaagga	0	AGGGCCAG	m6b	Created	no TS	-0.077000	-1.470000
hsa-miR-548aj-5p	agtgaCTTTTGCccaagga	0	UGCAAAAG	m7b	Disrupted	-0.031000	-0.105000	No effect
hsa-miR-548g-5p	agtgaCTTTTGCccaagga	0	UGCAAAAG	m7b	Disrupted	-0.031000	-0.105000	No effect
hsa-miR-548x-5p	agtgaCTTTTGCccaagga	0	UGCAAAAG	m7b	Disrupted	-0.031000	-0.105000	No effect
hsa-miR-3926	agtgacTTTGGCCcaagga	3	UGGCCAAA	m7b	Created	0.037000	0.043000	No effect
hsa-miR-4640-5p	agtgacttTGGCCCAagga	0	UGGGCCAG	m7a	Created	no TS	-0.077000	No effect
hsa-miR-4726-5p	agtgacttTGGCCCaagga	0	AGGGCCAG	m6b	Created	no TS	-0.077000	-1.470000
hsa-miR-548aj-5p	agtgaCTTTTGCccaagga	0	UGCAAAAG	m7b	Disrupted	-0.031000	-0.105000	No effect
hsa-miR-548g-5p	agtgaCTTTTGCccaagga	0	UGCAAAAG	m7b	Disrupted	-0.031000	-0.105000	No effect
hsa-miR-548x-5p	agtgaCTTTTGCccaagga	0	UGCAAAAG	m7b	Disrupted	-0.031000	-0.105000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699089G>C			COSN6188051		RK150_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3183	actttgAGAGAGGttttct	12	GCCUCUCU	m7b	Disrupted	0.038000	0.069000	0.140000
hsa-miR-4421	actttgAGACAGGTtttct	3	ACCUGUCU	m8a	Created	0.005000	-0.046000	No effect
hsa-miR-4723-3p	actttgAGAGAGGttttct	12	CCCUCUCU	m7b	Disrupted	0.044000	0.066000	No effect
hsa-miR-5699	actttgAGACAGGttttct	3	UCCUGUCU	m7b	Created	0.014000	-0.028000	-0.010000
hsa-miR-649	actttgagACAGGTTTtct	0	AAACCUGU	m8a	Created	0.046000	0.054000	-0.010000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699290G>A			COSN6188052		RK308_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3140-5p	attttTTCAGGatatttct	16	ACCUGAAU	m6b	Disrupted	-0.005000	no TS	0.060000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699411T>C			COSN8609377		J9_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1258	tacctaTCCTAACacaggg	4	AGUUAGGA	m7b	Disrupted	-0.047000	no TS	0.080000
hsa-miR-3122	tacctaTCCCAACacaggg	12	GUUGGGAC	m7a	Created	-0.100000	-0.098000	No effect
hsa-miR-3147	tacctatCCCAACacaggg	0	GGUUGGGC	m6b	Created	no TS	-0.020000	No effect
hsa-miR-3152-3p	tacctatcCTAACACAggg	5	UGUGUUAG	m8a	Disrupted	0.043000	no TS	0.540000
hsa-miR-4425	tacctaTCCCAACAcaggg	0	UGUUGGGA	m8a	Created	no TS	-0.067000	-1.260000
hsa-miR-5089	tacctATCCCAacacaggg	0	GUGGGAUU	m6b	Created	no TS	0.057000	-4.610000
hsa-miR-5191	taCCTATCCTaacacaggg	2	AGGAUAGG	m8a	(m8a->m7a)	-0.082000	-0.055000	No effect
hsa-miR-651	tacctATCCTAAcacaggg	4	UUUAGGAU	m7b	Disrupted	0.093000	no TS	0.530000
hsa-miR-769-3p	tacctATCCCAacacaggg	0	CUGGGAUC	m6b	Created	no TS	0.028000	-1.970000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699436A>T			COSN1848027		RK046_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3122	aagtTCCCAAagtaaccgt	12	GUUGGGAC	m6b	Disrupted	-0.100000	-0.146000	No effect
hsa-miR-3122	aagtTCCCAAagtaaccgt	12	GUUGGGAC	m6b	Disrupted	-0.1	-0.146	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699669->T			ICGC_sm20196		RK001_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3163	gaaacaaaATTTTATgaaac	0	UAUAAAAU	m7b	Created	0.702000	0.879000	-0.010000
hsa-miR-4282	gaaacaAAATTTTAtgaaac	0	UAAAAUUU	m8a	Created	1.121000	1.453000	-0.200000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699671T>G			COSN5030692		HX27T		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699708G>C			COSN14532075		8068588		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3714	ttactgCTGCCTTtttttt	2	GAAGGCAG	m7b	Created	0.083000	0.051000	-3.540000
hsa-miR-4530	ttaCTGCTGGctttttttt	0	CCCAGCAG	m7b	(m7b->m6b)	-0.122000	-0.031000	0.040000
hsa-miR-548an	ttactgcTGCCTTTTtttt	0	AAAAGGCA	m8a	Created	no TS	0.019000	-2.340000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699869G>A			COSN6188053		RK190_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5699974C>A			COSN6188054		RK122_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-126-5p	acacaagcTAATAATGttc	0	CAUUAUUA	m8a	Created	0.405000	0.597000	-0.360000
hsa-miR-27b-5p	acacAAGCTCataatgttc	0	AGAGCUUA	m6b	Disrupted	-0.024000	no TS	0.110000
hsa-miR-4453	acaCAAGCTCataatgttc	0	GAGCUUGG	m7a	(m7a->m6a)	no TS	-0.004000	-0.610000
hsa-miR-4538	acaCAAGCTCataatgttc	0	GAGCUUGG	m7a	(m7a->m6a)	no TS	-0.004000	-0.020000
hsa-miR-556-5p	acacaAGCTCATaatgttc	0	GAUGAGCU	m7b	Disrupted	-0.090000	no TS	9.450000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700029G>C			COSN7077585		8051974		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-576-3p	ttcttacaACATCTagcac	0	AAGAUGUG	m6b	Created	no TS	0.055000	No effect
hsa-miR-643	ttctTACAAGatctagcac	0	ACUUGUAU	m6b	Disrupted	0.054000	0.014000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700072G>C			COSN7077586		8051974		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-5696	gtttTAAATGAtttgggaa	1	CUCAUUUA	m7b	Disrupted	0.162000	0.096000	0.600000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700103G>C			COSN7077587		8051974		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1267	tgcagttgTCAACAGagaa	0	CCUGUUGA	m7b	Created	no TS	0.042000	-1.220000
hsa-miR-26b-3p	tgcagttgtGAACAGagaa	0	CCUGUUCU	m6b	Disrupted	0.037000	no TS	No effect
hsa-miR-367-5p	tgcagttgtCAACAGagaa	0	ACUGUUGC	m6b	Created	no TS	0.027000	-2.830000
hsa-miR-5003-5p	tgcaGTTGTGAacagagaa	1	UCACAACA	m7a	Disrupted	0.095000	0.065000	0.030000
hsa-miR-549	tgcAGTTGTCAacagagaa	7	UGACAACU	m8a	Created	0.003000	0.037000	-0.060000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700123G>A			COSN7077588		8051974		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-20b-3p	ttctCTACAGagaaacaaa	3	ACUGUAGU	m6b	Disrupted	0.063000	0.041000	No effect
hsa-miR-3191-5p	ttctctaCAGAGAaacaaa	2	CUCUCUGG	m6b	Disrupted	0.054000	0.030000	0.080000
hsa-miR-3674	ttcTCTACAAagaaacaaa	2	AUUGUAGA	m7b	(m6b->m7b)	-0.018000	0.017000	No effect
hsa-miR-4768-5p	ttctctacAGAGAAacaaa	0	AUUCUCUC	m6b	Disrupted	0.257000	0.181000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700153G>A			COSN7077589		8051974		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-5587-5p	aataTGACCAagttgagat	0	AUGGUCAC	m6b	Created	no TS	-0.019000	-0.400000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700172A>C			COSN1848029		RK157_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3153	gtggTTTCCCatgagcaat	0	GGGGAAAG	m6b	Created	-0.160000	-0.116000	No effect
hsa-miR-3978	gtggTTTCCAatgagcaat	2	GUGGAAAG	m6b	Disrupted	0.268000	0.211000	No effect
hsa-miR-4668-5p	gtggTTTCCCatgagcaat	0	AGGGAAAA	m6b	Created	-0.319000	-0.270000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700200T>A			COSN10003768		C0050T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-4793-5p	taagcaacCAGGATGTgca	7	ACAUCCUG	m8a	Created	-0.067000	-0.060000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700201G>T			COSN10003769		C0050T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-4761-5p	aagcaACCTTGatgtgcat	0	ACAAGGUG	m6b	Created	no TS	0.014000	No effect

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700435G>A			COSN8609378		2881_T		[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-2355-3p	aaaaaaaaAGGACAActgg	0	AUUGUCCU	m7b	Disrupted	-0.157000	no TS	1.850000
hsa-miR-511	aaaaaaaAAAGACAactgg	3	GUGUCUUU	m7b	Created	0.269000	0.233000	-0.030000
hsa-miR-676-3p	aaaaaaaaAGGACAactgg	0	CUGUCCUA	m6b	Disrupted	-0.088000	no TS	0.050000
hsa-miR-2355-3p	aaaaaaaaAGGACAActgg	0	AUUGUCCU	m7b	Disrupted	-0.157000	no TS	1.850000
hsa-miR-511	aaaaaaaAAAGACAactgg	3	GUGUCUUU	m7b	Created	0.269000	0.233000	-0.030000
hsa-miR-676-3p	aaaaaaaaAGGACAactgg	0	CUGUCCUA	m6b	Disrupted	-0.088000	no TS	0.050000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700454A>G			COSN6188055		RK077_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-425-5p	aagtaattTGTCATataaa	0	AAUGACAC	m6b	Created	no TS	-0.065000	-6.330000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700676T>G			COSN7077590		8047810		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3613-3p	acctTTTTTTGaattgact	0	ACAAAAAA	m7b	Disrupted	0.885000	0.907000	0.020000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700700G>T			COSN5507363		RK120_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1295b-3p	aaaacggaGGCCTATTttt	5	AAUAGGCC	m8a	Disrupted	-0.364000	-0.168000	0.010000
hsa-miR-3117-3p	aaaacggAGTCCTATtttt	0	AUAGGACU	m8a	Created	no TS	-0.131000	No effect
hsa-miR-3142	aaaacggAGGCCTattttt	20	AAGGCCUU	m6b	Disrupted	-0.283000	-0.142000	0.160000
hsa-miR-4757-5p	aaaacgGAGGCCTattttt	0	AGGCCUCU	m7a	Disrupted	NA	NA	3.090000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.5700960C>A			COSN1848032		RK023_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1245b-5p	gccagcgcAAGGCCTAttg	20	UAGGCCUU	m8a	Created	-0.308000	-0.580000	No effect
hsa-miR-1295a	gccagcgcaCGGCCTAttg	4	UUAGGCCG	m7b	(m7b->m6c)	-0.377000	-0.101000	No effect
hsa-miR-3142	gccagcgcAAGGCCTattg	20	AAGGCCUU	m7b	Created	-0.283000	-0.545000	No effect
hsa-miR-1245b-5p	gccagcgcAAGGCCTAttg	0	UAGGCCUU	m8a	Created	-0.308	-0.58	No effect
hsa-miR-1295a	gccagcgcaCGGCCTAttg	0	UUAGGCCG	m7b	(m7b->m6c)	-0.377	-0.101	No effect
hsa-miR-3142	gccagcgcAAGGCCTattg	0	AAGGCCUU	m7b	Created	-0.283	-0.545	No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Germline mutations in target sites of miRNAs in somatic mutation table

Location	SNP ID	Ancestral Allele	Allele	miR ID	Conservation	miRSite	FuncClass	Validation	context+ score change
5694133	rs10676727	-	-	hsa-miR-136-3p hsa-miR-4528	0	gatGATGATAatgatga gatgatgATAATGAtga	Unknown Unknown	N N	0.001 0.001
			GAT
5694361	rs114244809	T	T	hsa-miR-508-5p	14	ctagtCTGGAGTt	Disrupted	N	-0.203
			C	hsa-miR-3687 hsa-miR-4442 hsa-miR-6503-3p	12 12 12	ctaGTCCGGAgtt ctaGTCCGGAgtt CTAGTCCggagtt	Created Created Created	N N N	-0.262 -0.265 -0.212
5694381	rs151136508	-	-	hsa-miR-129-5p hsa-miR-3122 hsa-miR-3153 hsa-miR-3913-5p hsa-miR-450a-1-3p hsa-miR-4668-5p hsa-miR-6513-5p hsa-miR-6733-5p hsa-miR-6739-5p hsa-miR-887-5p	3 2 2 2 2 2 2 2 2 2	ttttccCAAAAAA tttTCCCAAAaaa tTTTCCCAaaaaa tttTCCCAAAaaa ttTTCCCAAAaaa TTTTCCCAaaaaa tttTCCCAAAaaa tTTTCCCAaaaaa tTTTCCCAaaaaa tttTCCCAAAaaa	Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown	N N N N N N N N N N	0.006 0.001 0.001 0.001 0.003 0.002 0.001 0.001 0.001 0.001
			A
5694616	rs191171387	G	G	hsa-miR-1226-3p hsa-miR-4733-3p	7 7	gaaCTGGTGAttt gaaCTGGTGAttt	Disrupted Disrupted	N N	-0.161 -0.143
			T	hsa-miR-421 hsa-miR-4709-5p hsa-miR-551b-5p	7 7 7	gaaCTGTTGAttt gaACTGTTGAttt gaactgTTGATTT	Created Created Created	N N N	-0.223 -0.286 -0.005
5694619	rs5829021	-	-	hsa-miR-1226-3p hsa-miR-4733-3p hsa-miR-548c-3p	7 7 10	CTGGTGAtttttt CTGGTGAtttttt ctggtGATTTTTt	Unknown Unknown Unknown	N N N	0.002 0.002 0.002
			T
5694667	rs71436132	T
			A	hsa-miR-4282	4	atttAAATTTTtt	Created	N	-0.021
5695822	rs78868144	G	G	hsa-miR-5003-5p hsa-miR-513b-5p	3 3	ctaGTTGTGAaag ctagTTGTGAAag	Disrupted Disrupted	N N	0.059 0.101
			C	hsa-miR-3942-3p hsa-miR-589-3p	3 3	ctagtTCTGAAAg ctaGTTCTGAaag	Created Created	N N	0.126 0.069
5695858	rs182423386	C	C	hsa-miR-1321 hsa-miR-149-3p hsa-miR-3616-3p hsa-miR-4436b-3p hsa-miR-4632-5p hsa-miR-4728-5p hsa-miR-4739 hsa-miR-4756-5p hsa-miR-6735-5p hsa-miR-6785-5p hsa-miR-6879-5p hsa-miR-6883-5p hsa-miR-7843-5p	2 2 2 2 2 2 2 2 2 2 2 2 2	tctgcCCTCCCTt tctgCCCTCCCtt tcTGCCCTCcctt tCTGCCCTccctt tCTGCCCTccctt tctgCCCTCCCtt tctgcCCTCCCTt tctgcCCTCCCTt tCTGCCCTccctt tctgCCCTCCCtt tCTGCCCTccctt tctgCCCTCCCtt tCTGCCCTccctt	Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted	N N N N N N N N N N N N N	0.029 0.016 0.005 -0.021 0.035 -0.04 0.02 0.029 -0.002 -0.021 0.007 -0.003 -0.002
			T	hsa-miR-1910-3p hsa-miR-3714 hsa-miR-4747-5p hsa-miR-5196-5p hsa-miR-605-3p hsa-miR-6511a-5p	2 2 2 2 2 2	TCTGCCTtccctt tCTGCCTTccctt tctgCCTTCCCtt tctgCCTTCCCtt tcTGCCTTCcctt TCTGCCTtccctt	Created Created Created Created Created Created	N N N N N N	0.049 0.07 0.031 -0.006 0.022 0.058
5696270	rs71859288	-	-	hsa-miR-3127-3p hsa-miR-6734-3p hsa-miR-6756-3p hsa-miR-6826-3p	2 2 2 3	gggGAAGGGGAag gGGGAAGGggaag gggGAAGGGGAag ggggaAGGGGAAg	Unknown Unknown Unknown Unknown	N N N N	-0.037 -0.013 -0.039 0.027
			G	hsa-miR-3679-3p	4	ggggaaGGGGGAAg	Unknown	N	-0.028
5696616	rs185412455	T	T	hsa-miR-3622a-5p hsa-miR-4269 hsa-miR-4645-5p hsa-miR-4673 hsa-miR-564 hsa-miR-6715b-5p	1 2 3 3 1 2	tcccCGTGCCTgg tccccGTGCCTGg tccccgTGCCTGG tccccgTGCCTGG tccCCGTGCCtgg tccccGTGCCTGg	Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted	N N N N N N	0.089 0.103 0.124 0.059 0.003 0.113
			G	hsa-miR-1538 hsa-miR-4532 hsa-miR-4745-3p hsa-miR-4747-3p	1 1 1 1	tccCCGGGCCtgg tCCCCGGGcctgg tccCCGGGCCtgg tcccCGGGCCTgg	Created Created Created Created	N N N N	-0.039 -0.083 -0.039 0.016
5696786	rs141874683	C	C	hsa-miR-4466 hsa-miR-675-5p hsa-miR-6820-5p	2 2 1	ggctgCCGCACCc ggctgCCGCACCc ggCTGCCGCAccc	Disrupted Disrupted Disrupted	N N N	0.025 0.006 -0.046
			T	hsa-miR-103a-3p hsa-miR-107 hsa-miR-3944-5p	2 2 2	ggcTGCTGCAccc ggcTGCTGCAccc ggctGCTGCACcc	Created Created Created	N N N	0.086 0.086 0.086
5696965	rs192711152	C	C	hsa-miR-1343-5p hsa-miR-4706 hsa-miR-4749-5p hsa-miR-4781-5p hsa-miR-6777-5p hsa-miR-6889-5p hsa-miR-939-5p	2 2 2 2 2 2 2	GCTCCCCgctcgc gcTCCCCGCtcgc gcTCCCCGCtcgc gctCCCCGCTcgc gCTCCCCGctcgc gCTCCCCGctcgc GCTCCCCgctcgc	Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted	N N N N N N N	0.061 -0.002 -0.039 -0.047 0.013 0.022 0.08
			A	hsa-miR-3192-5p hsa-miR-4300 hsa-miR-4487 hsa-miR-5591-5p hsa-miR-6090 hsa-miR-6726-5p hsa-miR-6827-5p hsa-miR-920	2 2 2 2 2 2 2 2	gCTCCCAGctcgc GCTCCCAgctcgc gctcCCAGCTCgc GCTCCCAgctcgc GCTCCCAgctcgc GCTCCCAgctcgc GCTCCCAgctcgc GCTCCCAgctcgc	Created Created Created Created Created Created Created Created	N N N N N N N N	0.112 0.036 0.112 0.008 -0.079 0.025 0.017 0.019
5697298	rs114203075	G	G	hsa-miR-3150a-5p hsa-miR-3150b-5p	2 2	ttgacCGAGGTTt ttgacCGAGGTTt	Disrupted Disrupted	N N	-0.025 -0.025
			A	hsa-miR-5587-5p hsa-miR-6813-3p	2 2	tTGACCAAggttt ttgaCCAAGGTtt	Created Created	N N	0.026 -0.068
5697556	rs13407681	-	C	hsa-miR-100-3p hsa-miR-548aj-5p hsa-miR-548f-5p hsa-miR-548g-5p hsa-miR-548x-5p	4 9 9 9 9	agCAAGCTTttgc agcaagCTTTTGC agcaagCTTTTGC agcaagCTTTTGC agcaagCTTTTGC	Unknown Unknown Unknown Unknown Unknown	N N N N N	0.107 0.124 0.17 0.124 0.124
			G	hsa-miR-3200-3p	4	aGCAAGGTtttgc	Unknown	N	-0.018
5698229	rs199684066	-	-	hsa-miR-223-5p hsa-miR-511-3p	10 10	agtatAATACACAtggt agtataaTACACATggt	Unknown Unknown	N N	0.022 0.017
			ATA	hsa-miR-126-5p hsa-miR-4795-3p	8 10	agtaTAATAATAcacatggt agtatAATAATAcacatggt	Unknown Unknown	N N	0.256 0.295
5698838	rs147356006	A	A	hsa-miR-1297 hsa-miR-26a-5p hsa-miR-26b-5p hsa-miR-4465 hsa-miR-5588-3p	1 1 1 1 1	tctgggACTTGAA tctgggACTTGAA tctgggACTTGAA tctgggACTTGAA tcTGGGACTtgaa	Disrupted Disrupted Disrupted Disrupted Disrupted	N N N N N	0.061 0.057 0.061 0.064 -0.04
			G	hsa-miR-4323 hsa-miR-498	1 1	tcTGGGGCTtgaa tctgggGCTTGAA	Created Created	N N	-0.086 0.005
5699135	rs144951011	A	A	hsa-miR-545-5p	10	tctTTTACTGtgt	Disrupted	N	0.056
			G	hsa-miR-3120-3p hsa-miR-545-3p hsa-miR-548aj-5p hsa-miR-548f-5p hsa-miR-548g-5p hsa-miR-548p hsa-miR-548x-5p	3 10 13 13 13 10 13	tcttTTGCTGTgt tctTTTGCTGtgt tCTTTTGCtgtgt tCTTTTGCtgtgt tCTTTTGCtgtgt tcTTTTGCTgtgt tCTTTTGCtgtgt	Created Created Created Created Created Created Created	N N N N N N N	0.013 0.024 0.065 0.065 0.065 0.132 0.065
5699882	rs56096754	A
			G	hsa-miR-1206 hsa-miR-1250-3p hsa-miR-153-5p hsa-miR-26b-3p hsa-miR-5696 hsa-miR-579-3p hsa-miR-664b-3p hsa-miR-6853-3p	5 5 5 20 5 5 5 5	taaaATGAACAga tAAAATGAacaga tAAAATGAacaga taaaatGAACAGA taAAATGAAcaga taAAATGAAcaga taAAATGAAcaga taaAATGAACAga	Created Created Created Created Created Created Created Created	N N N N N N N N	0.03 0.159 0.166 -0.009 0.134 0.134 0.134 0.057
5700434	rs201271298	-	-	hsa-miR-2355-3p hsa-miR-676-3p	1 1	aaaaaaAGGACAA aaaaaaAGGACAA	Unknown Unknown	N N	0.003 0.001
			A
5700434	rs78322351	A	A	hsa-miR-2355-3p hsa-miR-676-3p	1 1	aaaaaaAGGACAA aaaaaaAGGACAA	Disrupted Disrupted	N N	-0.157 -0.088
			G	hsa-miR-204-5p hsa-miR-211-5p hsa-miR-4433b-5p hsa-miR-4646-3p hsa-miR-6832-3p	0	aaaAAAGGGAcaa aaaAAAGGGAcaa aaaaaaGGGACAA aaaaaaGGGACAA aaAAAAGGGAcaa	Created Created Created Created Created	N N N N N	-0.086 -0.095 -0.115 -0.178 -0.139
5700653	rs191865545	A	A	hsa-miR-105-5p hsa-miR-1468-3p hsa-miR-548aj-5p hsa-miR-548aw hsa-miR-548f-5p hsa-miR-548g-5p hsa-miR-548x-5p hsa-miR-7-1-3p hsa-miR-7-2-3p hsa-miR-7853-5p	13 11 11 11 11 11 11 12 12 13	ttttGCATTTGtt TTTTGCAtttgtt TTTTGCAtttgtt TTTTGCAtttgtt TTTTGCAtttgtt TTTTGCAtttgtt TTTTGCAtttgtt ttttgcATTTGTT ttttgcATTTGTT ttttGCATTTGtt	Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted	N N N N N N N N N N	-0.158 0.003 -0.062 -0.014 -0.062 -0.062 -0.062 0.09 0.09 -0.102
			G	hsa-miR-495-3p hsa-miR-5688	12 12	ttttgcGTTTGTT ttttgcGTTTGTT	Created Created	N N	0.051 0.051
5700699	rs182953290	G	G	hsa-miR-1245b-5p hsa-miR-1295b-3p hsa-miR-3142	2 2 2	aacggAGGCCTAt aacggaGGCCTAT aacggAGGCCTAt	Disrupted Disrupted Disrupted	N N N	-0.138 -0.196 -0.141
			A	hsa-miR-1468-5p	13	AACGGAAgcctat	Created	N	-0.141
5701144	rs186845039	A	A	hsa-miR-4775 hsa-miR-590-3p	20 20	agttgtAAAATTA agttgTAAAATTA	Disrupted Disrupted	N N	-0.076 0.053
			G	hsa-miR-5003-5p hsa-miR-513b-5p	21 21	aGTTGTGAaatta agTTGTGAAatta	Created Created	N N	-0.138 -0.102
5701259	rs192140740	C	C	hsa-miR-6752-5p hsa-miR-6842-5p hsa-miR-7110-5p	2 2 2	CACCCCCccttgg CACCCCCccttgg CACCCCCccttgg	Disrupted Disrupted Disrupted	N N N	-0.196 -0.215 -0.224
			A	hsa-miR-342-5p hsa-miR-4651 hsa-miR-4664-5p hsa-miR-4761-5p hsa-miR-608 hsa-miR-6737-5p hsa-miR-6742-5p hsa-miR-6747-5p hsa-miR-6812-5p hsa-miR-6819-5p hsa-miR-92a-2-5p	2 2 2 4 2 2 2 2 2 2 2	CACCCCAccttgg CACCCCAccttgg CACCCCAccttgg cacccCACCTTGg CACCCCAccttgg CACCCCAccttgg cACCCCACcttgg CACCCCAccttgg CACCCCAccttgg CACCCCAccttgg caCCCCACCttgg	Created Created Created Created Created Created Created Created Created Created Created	N N N N N N N N N N N	-0.166 -0.219 -0.166 -0.121 -0.22 -0.171 -0.199 -0.18 -0.162 -0.181 -0.251
5701260	rs184226472	C
			A	hsa-miR-1296-3p hsa-miR-4447 hsa-miR-4472 hsa-miR-6751-5p hsa-miR-6752-5p hsa-miR-6803-5p hsa-miR-6835-5p hsa-miR-6842-5p hsa-miR-7110-5p	2 2 2 2 2 2 2 2 2	acCCCCACTtggt aCCCCCACttggt aCCCCCACttggt ACCCCCActtggt ACCCCCActtggt ACCCCCActtggt ACCCCCActtggt ACCCCCActtggt ACCCCCActtggt	Created Created Created Created Created Created Created Created Created	N N N N N N N N N	-0.182 -0.263 -0.263 -0.189 -0.226 -0.199 -0.201 -0.228 -0.229

Genome Browser