SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_003057 |
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Gene Symbol: | SLC22A1 |
Description: | Homo sapiens solute carrier family 22 (organic cation transporter), member 1 (SLC22A1), transcript variant 1, mRNA. |
Gene Location: | chr6(+):160542862-160579750 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr6:g.160158599C>T | COSN4857176 | tumor_4121361 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3913-3p |
gttttgcggTGATGTCgtg |
0 | AGACAUCA | m7b | (m6c->m7b) | no TS | -0.113000 |
-1.269000 |
hsa-miR-499a-3p |
gttttgcgGTGATGTcgtg |
0 | AACAUCAC | m7b | Created | no TS | -0.101000 |
-6.750000 |
hsa-miR-499b-3p |
gttttgcgGTGATGTcgtg |
0 | AACAUCAC | m7b | Created | no TS | -0.101000 |
-10.990000 |