SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001145145 |
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Gene Symbol: | SLC1A5 |
Description: | Homo sapiens solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5), transcript variant 2, mRNA. |
Gene Location: | chr19(-):47278139-47288134 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr19:g.46775154G>T | COSN6145609 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-361-3p |
ccaCTGGGGGgatgttaca |
0 | UCCCCCAG | m7b | (m7b->m6c) | -0.589000 | -0.382000 |
1.120000 |
hsa-miR-499a-3p |
ccactgggGTGATGTTaca |
0 | AACAUCAC | m8a | Created | no TS | -0.098000 |
-3.060000 |
hsa-miR-499b-3p |
ccactgggGTGATGTTaca |
0 | AACAUCAC | m8a | Created | no TS | -0.098000 |
-1.950000 |