SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_007163
Gene Symbol: SLC14A2
Description: Homo sapiens solute carrier family 14 (urea transporter), member 2 (SLC14A2), transcript variant 2, mRNA.
Gene Location: chr18(+):43194765-43263060
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.45682536C>T COSN8866643 SNUH_G10_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3171 tgtctaaaATACATCagtg
 0 AGAUGUAU m7b Created no TS -0.305000 -7.740000

Mutation Mutation ID Sample Name Cancer Type
chr18:g.45682832C>T COSN9224490 8057643 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3937 ggtggctcaCGCCTGTaat
 0 ACAGGCGG m7a (m7a->m6b) NA NA 3.290000
hsa-miR-4514 ggtggctcaTGCCTGTaat
 0 ACAGGCAG m7a (m6b->m7a) NA NA -2.570000

Mutation Mutation ID Sample Name Cancer Type
chr18:g.45682859C>T COSN5427525 RK125_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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