SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_001242692
Gene Symbol:	SLC14A2
Description:	Homo sapiens solute carrier family 14 (urea transporter), member 2 (SLC14A2), transcript variant 2, mRNA.
Gene Location:	chr18(+):42792946-43263060
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr18:g.45682536C>T			COSN8866643		SNUH_G10_S1		[haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3171	tgtctaaaATACATCagtg	0	AGAUGUAU	m7b	Created	no TS	-0.305000	-7.740000

Mutation			Mutation ID		Sample Name		Cancer Type
chr18:g.45682832C>T			COSN9224490		8057643		[pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-3937	ggtggctcaCGCCTGTaat	0	ACAGGCGG	m7a	(m7a->m6b)	NA	NA	3.290000
hsa-miR-4514	ggtggctcaTGCCTGTaat	0	ACAGGCAG	m7a	(m6b->m7a)	NA	NA	-2.570000

Mutation			Mutation ID		Sample Name		Cancer Type
chr18:g.45682859C>T			COSN5427525		RK125_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Germline mutations in target sites of miRNAs in somatic mutation table

Location	SNP ID	Ancestral Allele	Allele	miR ID	Conservation	miRSite	FuncClass	Validation	context+ score change
45682536	rs3745008	C
			T	hsa-miR-3171	2	ctaaaATACATCA	Created	N	-0.305

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