| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001128142 |
|---|---|
| Gene Symbol: | RWDD3 |
| Description: | Homo sapiens RWD domain containing 3 (RWDD3), transcript variant 2, mRNA. |
| Gene Location: | chr1(+):95699710-95712781 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.95246879A>C | ICGC_snv_30 | GC1_T | [stomach][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1343 |
aaatggaagCCAGGAatct |
0 | CUCCUGGG | m6b | Created | -0.158 | -0.33 |
-1.58 |
| hsa-miR-2115-5p |
aaaTGGAAGCcaggaatct |
0 | AGCUUCCA | m7b | (m6b->m7b) | no TS | -0.252 |
-2.26 |
| hsa-miR-221-5p |
aaatggaaGCCAGGaatct |
0 | ACCUGGCA | m6b | Created | -0.492 | -0.708 | No effect |
| hsa-miR-3120-5p |
aaatggaAGACAGGaatct |
0 | CCUGUCUG | m7a | Disrupted | NA | NA |
8.15 |
| hsa-miR-4421 |
aaatggaAGACAGGaatct |
0 | ACCUGUCU | m7b | Disrupted | -0.411 | no TS |
10.11 |
| hsa-miR-5699 |
aaatggaAGACAGGAatct |
0 | UCCUGUCU | m8a | Disrupted | -0.432 | no TS |
5.81 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr1:g.95247063C>T | ICGC_ssm_v3_125405 | HCC61T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |