| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_207116 |
|---|---|
| Gene Symbol: | RNF216 |
| Description: | Homo sapiens ring finger protein 216 (RNF216), transcript variant 1, mRNA. |
| Gene Location: | chr7(-):5659671-5821361 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr7:g.5622627C>G | COSN9994800 | AOCS-141-3-2 | [ovary][NS][other][neoplasm] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3184-5p |
tgtgaactGCCCCTCccct |
1 |
UGAGGGGC | m7b | Disrupted | -0.354000 | -0.160000 |
2.470000 |
| hsa-miR-423-5p |
tgtgaactGCCCCTCccct |
1 |
UGAGGGGC | m7b | Disrupted | -0.336000 | -0.151000 |
0.040000 |
| hsa-miR-4640-5p |
tgtgaaCTGGCCCtcccct |
2 |
UGGGCCAG | m7b | Created | -0.606000 | -0.845000 |
-0.010000 |
| hsa-miR-4688 |
tgtgaacTGCCCCTcccct |
1 |
UAGGGGCA | m7b | Disrupted | -0.124000 | no TS |
0.010000 |
| hsa-miR-4726-5p |
tgtgaaCTGGCCCTcccct |
2 |
AGGGCCAG | m8a | Created | -0.627000 | -0.820000 | No effect |
| hsa-miR-486-3p |
tgtgaaCTGCCCCtcccct |
0 | CGGGGCAG | m7b | Disrupted | -0.227000 | -0.026000 | No effect |
| hsa-miR-548au-3p |
tgtgAACTGCCcctcccct |
0 | UGGCAGUU | m7b | Disrupted | -0.169000 | -0.076000 |
2.400000 |