SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_020630 |
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Gene Symbol: | RET |
Description: | Homo sapiens ret proto-oncogene (RET), transcript variant 4, mRNA. |
Gene Location: | chr10(+):43572516-43622952 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr10:g.43127084T>C | cosmic_v64_1760542 | Leukemia/T-ALL | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-223-5p |
ggataAATACACaaatctg |
0 | CGUGUAUU | m7b | Created | no TS | -0.236 |
-1.12 |
hsa-miR-5010-3p |
ggataaatACACAAAtctg |
0 | UUUUGUGU | m7b | Created | no TS | -0.11 |
-1.16 |
hsa-miR-568 |
ggataaaTATACAaatctg |
1 |
AUGUAUAA | m6b | Disrupted | -0.044 | no TS |
1.98 |
hsa-miR-599 |
ggataaatACACAAatctg |
0 | GUUGUGUC | m6b | Created | no TS | -0.089 |
-6.56 |