| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_002908 |
|---|---|
| Gene Symbol: | REL |
| Description: | Homo sapiens v-rel reticuloendotheliosis viral oncogene homolog (avian) (REL), mRNA. |
| Gene Location: | chr2(+):61108751-61150178 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr2:g.60922793T>C | ICGC_6EEFB43E-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-204-3p |
ctgtaaTCCCAGCactttg |
0 | GCUGGGAA | m7a | Created | NA | NA |
0.0085 |
| hsa-miR-3159 |
ctgTAATCCTAgcactttg |
3 |
UAGGAUUA | m8a | Disrupted | -0.159 | no TS |
3.32 |
| hsa-miR-5089 |
ctgtAATCCCAgcactttg |
0 | GUGGGAUU | m7b | Created | no TS | -0.068 |
-0.46 |
| hsa-miR-512-3p |
ctgtaatccCAGCACTTtg |
0 | AAGUGCUG | m8a | (m7b->m8a) | no TS | -0.105 | No effect |
| hsa-miR-5589-5p |
ctgtaatCCCAGCactttg |
0 | GGCUGGGU | m6b | Created | no TS | -0.148 |
-13.73 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr2:g.60923006C>T | ICGC_6EEFB902-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-143-5p |
tcacaccACTGCACtccag |
0 | GGUGCAGU | m7b | Created | no TS | -0.158 |
-0.18 |
| hsa-miR-4746-3p |
tcacacCACCGCactccag |
2 |
AGCGGUGC | m6b | Disrupted | -0.227 | no TS |
6.63 |
| hsa-miR-5693 |
tcacaCCACTGCactccag |
0 | GCAGUGGC | m7a | Created | NA | NA |
-1.966 |