| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_024870 |
|---|---|
| Gene Symbol: | PREX2 |
| Description: | Homo sapiens phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 (PREX2), transcript variant 1, mRNA. |
| Gene Location: | chr8(+):68864602-69143897 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.68231494T>C | COSN5114269 | BN34T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3919 |
tttttttTTCTCTGtaaat |
0 | GCAGAGAA | m7b | Created | no TS | -0.239000 |
-2.660000 |
| hsa-miR-4797-5p |
tttttttttCTCTGTaaat |
1 |
GACAGAGU | m6b | Created | -0.120000 | -0.271000 |
-6.280000 |
| hsa-miR-3919 |
tttttttTTCTCTGtaaat |
0 | GCAGAGAA | m7b | Created | no TS | -0.239000 |
-2.660000 |
| hsa-miR-4797-5p |
tttttttttCTCTGTaaat |
1 |
GACAGAGU | m6b | Created | -0.120000 | -0.271000 |
-6.280000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.68231496C>T | COSN6519027 | HCC164T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3613-3p |
tttttTTTTTTGTaaatct |
0 | ACAAAAAA | m8a | Created | no TS | -0.101000 |
-0.320000 |
| hsa-miR-520d-5p |
ttttttttTTTGTAaatct |
0 | CUACAAAG | m6b | Created | no TS | -0.035000 |
-5.700000 |
| hsa-miR-524-5p |
ttttttttTTTGTAaatct |
0 | CUACAAAG | m6b | Created | no TS | -0.035000 |
-6.200000 |