SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001199756 |
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Gene Symbol: | PPP2R5A |
Description: | Homo sapiens protein phosphatase 2, regulatory subunit B, alpha (PPP2R5A), transcript variant 2, mRNA. |
Gene Location: | chr1(+):212475147-212535205 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.212360797T>C | COSN163432 | GC8_T | [stomach][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-214-5p |
tctgccgGACAGGCAgagt |
0 | UGCCUGUC | m8a | Created | no TS | -0.378000 |
-1.880000 |
hsa-miR-214-5p |
tctgccgGACAGGCAgagt |
0 | UGCCUGUC | m8a | Created | no TS | -0.378 |
-1.88 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.212360843A>G | COSN163433 | GC7_T | [stomach][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-19a-5p |
aattaCAAAACaaacctca |
0 | AGUUUUGC | m6b | Disrupted | -0.174000 | -0.088000 |
0.160000 |
hsa-miR-19b-1-5p |
aattaCAAAACaaacctca |
0 | AGUUUUGC | m6b | Disrupted | -0.177000 | -0.088000 |
0.180000 |
hsa-miR-19b-2-5p |
aattaCAAAACaaacctca |
0 | AGUUUUGC | m6b | Disrupted | -0.177000 | -0.088000 |
0.280000 |
hsa-miR-2052 |
aattaCAAAACAaacctca |
0 | UGUUUUGA | m7a | Disrupted | -0.085000 | no TS |
0.980000 |
hsa-miR-5087 |
aattacaaaACAAACCtca |
0 | GGGUUUGU | m7b | (m7b->m6c) | -0.278000 | no TS |
-0.800000 |
hsa-miR-19a-5p |
aattaCAAAACaaacctca |
0 | AGUUUUGC | m6b | Disrupted | -0.174 | -0.088 |
0.16 |
hsa-miR-19b-1-5p |
aattaCAAAACaaacctca |
0 | AGUUUUGC | m6b | Disrupted | -0.177 | -0.088 |
0.18 |
hsa-miR-19b-2-5p |
aattaCAAAACaaacctca |
0 | AGUUUUGC | m6b | Disrupted | -0.177 | -0.088 |
0.28 |
hsa-miR-2052 |
aattaCAAAACAaacctca |
0 | UGUUUUGA | m7a | Disrupted | -0.085 | no TS |
0.98 |
hsa-miR-5087 |
aattacaaaACAAACCtca |
0 | GGGUUUGU | m7b | (m7b->m6c) | -0.278 | no TS |
-0.8 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.212361247T>C | COSN1429530 | RK084_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-96-3p |
acccagaaACATGATgggg |
0 | AAUCAUGU | m7b | Created | no TS | -0.041000 |
-2.030000 |
hsa-miR-96-3p |
acccagaaACATGATgggg |
0 | AAUCAUGU | m7b | Created | no TS | -0.041000 |
-2.030000 |
hsa-miR-96-3p |
acccagaaACATGATgggg |
0 | AAUCAUGU | m7b | Created | no TS | -0.041000 |
-2.030000 |
hsa-miR-96-3p |
acccagaaACATGATgggg |
0 | AAUCAUGU | m7b | Created | no TS | -0.041 |
-2.03 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.212361690T>G | COSN6440765 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-505-3p |
aagGTTGACGatatagagg |
0 | CGUCAACA | m7a | (m6a->m7a) | NA | NA |
-0.020000 |