SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_007195
Gene Symbol: POLI
Description: Homo sapiens polymerase (DNA directed) iota (POLI), mRNA.
Gene Location: chr18(+):51795848-51824604
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.54295046A>G COSN6127545 RK136_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4724-5p ggccGTTCAGTaaacattg
 2
 AACUGAAC m7b Created 0.107000 -0.053000 -0.600000

Mutation Mutation ID Sample Name Cancer Type
chr18:g.54296322C>T COSN6127546 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3678-5p gagaaTGTACGGgctatgt
 1
 UCCGUACA m7b Disrupted -0.159000 no TS 3.990000
hsa-miR-3940-3p gagaatgtaCGGGCTatgt
 1
 CAGCCCGG m6b Disrupted -0.131000 no TS 3.860000

Mutation Mutation ID Sample Name Cancer Type
chr18:g.54297251T>A COSN6127547 RK176_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-15a-5p gatgctttcTGCTGCTttc
 2
 UAGCAGCA m7b (m7b->m6c) -0.090000 no TS 0.090000
hsa-miR-15b-5p gatgctttcTGCTGCTttc
 2
 UAGCAGCA m7b (m7b->m6c) -0.100000 no TS 0.060000
hsa-miR-16-5p gatgctttcTGCTGCTttc
 2
 UAGCAGCA m7b (m7b->m6c) -0.100000 no TS 0.020000
hsa-miR-195-5p gatgctttcTGCTGCTttc
 2
 UAGCAGCA m7b (m7b->m6c) -0.109000 no TS 0.030000
hsa-miR-424-5p gatgctttcTGCTGCTttc
 2
 CAGCAGCA m7b (m7b->m6c) -0.100000 no TS 0.400000
hsa-miR-4766-5p gatgCTTTCAGctgctttc
 0 UCUGAAAG m7b Created no TS 0.053000 No effect
hsa-miR-497-5p gatgctttcTGCTGCTttc
 2
 CAGCAGCA m7b (m7b->m6c) -0.053000 no TS 0.050000
hsa-miR-646 gatgctttcAGCTGCTTtc
 0 AAGCAGCU m8a (m7b->m8a) no TS -0.079000 -0.500000
hsa-miR-922 gatgcttTCTGCTGCtttc
 1
 GCAGCAGA m8a Disrupted -0.083000 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr18:g.54297772C>G COSN8550485 tumor_4163639 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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