SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_172240 |
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Gene Symbol: | POC1B |
Description: | Homo sapiens POC1 centriolar protein homolog B (Chlamydomonas) (POC1B), transcript variant 2, mRNA. |
Gene Location: | chr12(-):89813497-89920039 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr12:g.89420402T>C | COSN5869931 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4803 |
aaaTTATGTTAgtgtgttt |
5 |
UAACAUAA | m8a | Disrupted | -0.073000 | no TS |
0.950000 |
hsa-miR-888-3p |
aaattaTGTCAGTgtgttt |
0 | GACUGACA | m7b | Created | no TS | -0.208000 |
-3.210000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.89420975T>G | COSN9738721 | C0041T | [kidney][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-323a-3p |
aggacTAATGTaaacacat |
0 | CACAUUAC | m6b | Created | no TS | -0.038000 |
-0.770000 |