SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001199777
Gene Symbol: POC1B
Description: Homo sapiens POC1 centriolar protein homolog B (Chlamydomonas) (POC1B), transcript variant 2, mRNA.
Gene Location: chr12(-):89813497-89919344
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.89420402T>C COSN5869931 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4803 aaaTTATGTTAgtgtgttt
 5
 UAACAUAA m8a Disrupted -0.073000 no TS 0.950000
hsa-miR-888-3p aaattaTGTCAGTgtgttt
 0 GACUGACA m7b Created no TS -0.208000 -3.210000

Mutation Mutation ID Sample Name Cancer Type
chr12:g.89420975T>G COSN9738721 C0041T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-323a-3p aggacTAATGTaaacacat
 0 CACAUUAC m6b Created no TS -0.038000 -0.770000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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