SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001184785
Gene Symbol: PARD3
Description: Homo sapiens par-3 partitioning defective 3 homolog (C. elegans) (PARD3), transcript variant 2, mRNA.
Gene Location: chr10(-):34398487-35104253
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.34110369A>G COSN10066395 C0016T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-433 gtgtctATCATGAggggag
 2
 AUCAUGAU m7b Disrupted 0.045000 no TS 0.250000

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34110436G>A COSN6069398 RK144_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2355-5p tctgtgTGGGGAacgtggg
 3
 AUCCCCAG m6b Disrupted -0.048000 no TS No effect
hsa-miR-4286 tctgtGTGGGGaacgtggg
 2
 ACCCCACU m6b Disrupted -0.078000 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34110527C>A COSN1486683 RK026_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2054 caacATTACAaataaagtg
 1
 CUGUAAUA m6b Created 0.050000 0.043000 -7.070000
hsa-miR-2054 caacATTACAaataaagtg
 0 CUGUAAUA m6b Created 0.05 0.043 -7.07

Mutation Mutation ID Sample Name Cancer Type
chr10:g.34111155G>A COSN15193873 LP6005334-DNA_E01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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