SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_007226
Gene Symbol:	NXPH2
Description:	Homo sapiens neurexophilin 2 (NXPH2), mRNA.
Gene Location:	chr2(-):139426726-139537811
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.138669176T>A			COSN1791257		RK182_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.138669553G>T			COSN9063245		AOCS-104-1-6		[ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-1236	aggactaaaGGAAGAGaag	1	CCUCUUCC	m7b	(m7b->m6b)	-0.348000	-0.092000	2.360000
hsa-miR-4729	aggacTAAATGAagagaag	0	UCAUUUAU	m7a	Created	no TS	0.035000	0.070000
hsa-miR-5696	aggacTAAATGAagagaag	0	CUCAUUUA	m7b	Created	no TS	-0.015000	-0.010000

Mutation			Mutation ID		Sample Name		Cancer Type
chr2:g.138670531A>G			COSN1791259		RK100_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-4734	ggttaCCGCAGaaacagca	2	GCUGCGGG	m6b	Disrupted	-0.219000	no TS	7.980000
hsa-miR-544a	ggttaccGCAGAAacagca	2	AUUCUGCA	m6b	Disrupted	-0.062000	no TS	1.260000
hsa-miR-718	ggttaccGCGGAAacagca	0	CUUCCGCC	m6b	Created	no TS	-0.197000	-1.400000
hsa-miR-937	ggttacCGCGGAaacagca	0	AUCCGCGC	m6b	Created	no TS	-0.305000	-0.010000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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