SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_080723
Gene Symbol: NRSN1
Description: Homo sapiens neurensin 1 (NRSN1), mRNA.
Gene Location: chr6(+):24126413-24147757
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.24146000G>C COSN14650298 PCSI_0007_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3663-5p ttaaaaAGACCAGgccagt
 11
 GCUGGUCU m7b Created -0.185000 -0.397000 1.230000
hsa-miR-3663-5p ttaaaaAGACCAGgccagt
 11
 GCUGGUCU m7b Created -0.185000 -0.397000 1.230000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24146092C>T COSN4927133 PD4006a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4724-5p tcacacttGTTCAGTTcag
 0 AACUGAAC m8a Created no TS -0.170000 -2.880000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24146356C>T COSN5086566 HX22T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4524b-3p tcttccattCCTGTCTCac
 8
 GAGACAGG m8a (m8a->m7b) -0.192000 no TS 0.720000
hsa-miR-4694-3p tctTCCATTTctgtctcac
 2
 CAAAUGGA m7b (m6b->m7b) -0.231000 -0.288000 -0.400000
hsa-miR-5680 tcttcCATTTCTgtctcac
 0 GAGAAAUG m7b Created no TS -0.007000 -1.890000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24146768A>C COSN9905083 C0062T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-129-5p tgacCAAAAAaaattaatt
 1
 CUUUUUGC m6b Disrupted 0.067000 no TS 0.730000
hsa-miR-19a-5p tgacCAAAACaaattaatt
 0 AGUUUUGC m6b Created no TS -0.004000 -0.740000
hsa-miR-19b-1-5p tgacCAAAACaaattaatt
 0 AGUUUUGC m6b Created no TS -0.004000 -3.460000
hsa-miR-19b-2-5p tgacCAAAACaaattaatt
 0 AGUUUUGC m6b Created no TS -0.004000 -3.540000
hsa-miR-2052 tgacCAAAACAaattaatt
 0 UGUUUUGA m7a Created no TS -0.003000 -1.760000
hsa-miR-4775 tgaccaaaaAAAATTAAtt
 0 UUAAUUUU m8a (m8a->m7b) 0.080000 0.104000 -0.120000
hsa-miR-590-3p tgaccaaaaAAAATTAatt
 7
 UAAUUUUA m7a (m7a->m6b) 0.304000 0.190000 -0.010000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24147049G>C COSN9777952 AOCS-139-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4289 attctttCACAATGagact
 0 GCAUUGUG m7b Created no TS -0.198000 -6.720000
hsa-miR-4766-5p attCTTTCAGAatgagact
 3
 UCUGAAAG m8a Disrupted -0.162000 no TS No effect


Mutation Mutation ID Sample Name Cancer Type
chr6:g.24147355C>T COSN8312887 EOPC-03_tumor [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.24147420T>C COSN5086567 HX29T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5197-5p attgcatTGCCATTccttc
 0 CAAUGGCA m7b Created no TS -0.199000 -1.940000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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