| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001025433 |
|---|---|
| Gene Symbol: | NQO1 |
| Description: | Homo sapiens NAD(P)H dehydrogenase, quinone 1 (NQO1), transcript variant 1, mRNA. |
| Gene Location: | chr16(-):69743303-69760533 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr16:g.69710066T>G | ICGC_D455DF9C-2A78-11E2-951E-21FD496BB9B8 | CPCG_0103_Pr_P_P5 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3165 |
caggcgtgATCCACCacac |
0 | AGGUGGAU | m7b | Disrupted | -0.187 | no TS |
-0.11 |
| hsa-miR-4284 |
caggcGTGAGCCaccacac |
0 | GGGCUCAC | m7b | Created | no TS | -0.176 |
-0.89 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr16:g.69710284G>A | ICGC_401533 | TCGA-AA-3510-01A-01D-1408-10 | ColonAdenocarcinoma(TCGA,US) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-144-5p |
tggtgTGATATCggctcac |
0 | GGAUAUCA | m7b | Created | no TS | 0.013 |
-0.02 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr16:g.69710363T>C | COSN7269424 | 8016470 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1255a |
gcagTCATCCacttttttt |
0 | AGGAUGAG | m6b | Created | no TS | -0.120000 |
-5.360000 |
| hsa-miR-1255b-5p |
gcagTCATCCacttttttt |
0 | CGGAUGAG | m6b | Created | no TS | -0.120000 |
-6.660000 |
| hsa-miR-3681-5p |
gcagtcATCCACTtttttt |
0 | UAGUGGAU | m7b | Created | no TS | -0.198000 |
-1.180000 |
| hsa-miR-3691-5p |
gcagtCATCCACTtttttt |
6 |
AGUGGAUG | m8a | Created | -0.222000 | -0.450000 |
-0.070000 |
| hsa-miR-4796-3p |
gcagtcatCCACTTTtttt |
0 | UAAAGUGG | m7b | Created | no TS | -0.152000 | No effect |
| hsa-miR-548n |
gcagtcatcTACTTTTttt |
0 | CAAAAGUA | m7b | (m7b->m6b) | -0.021000 | no TS |
-0.010000 |
| hsa-miR-548t-5p |
gcagtcatcCACTTTTttt |
0 | CAAAAGUG | m7b | (m6b->m7b) | no TS | -0.053000 | No effect |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr16:g.69710800T>C | COSN6092835 | RK181_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1245a |
tcttatGATCACTatcatg |
0 | AAGUGAUC | m7b | Created | no TS | -0.394000 |
-0.160000 |
| hsa-miR-154-3p |
tctTATGATTactatcatg |
5 |
AAUCAUAC | m7a | (m7a->m6b) | -0.108000 | -0.108000 | No effect |
| hsa-miR-487a |
tctTATGATTactatcatg |
5 |
AAUCAUAC | m7a | (m7a->m6b) | -0.101000 | -0.101000 |
-0.040000 |