SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001040214
Gene Symbol: NKAIN2
Description: Homo sapiens Na+/K+ transporting ATPase interacting 2 (NKAIN2), transcript variant 1, mRNA.
Gene Location: chr6(+):124125068-125146786
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.124823468C>T COSN1324451 HCC77T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1268a tgcaggaCACGCCCatctt
 5
 CGGGCGUG m7b Disrupted -0.548000 no TS 1.140000
hsa-miR-1268b tgcaggaCACGCCCatctt
 5
 CGGGCGUG m7b Disrupted -0.548000 no TS 0.860000
hsa-miR-3945 tgcaggacATGCCCatctt
 2
 AGGGCAUA m6b Created -0.143000 -0.316000 -0.720000
hsa-miR-4253 tgcaggaCATGCCCatctt
 2
 AGGGCAUG m7b Created -0.133000 -0.543000 -3.800000
hsa-miR-1268a tgcaggaCACGCCCatctt
 5
 CGGGCGUG m7b Disrupted -0.548 no TS 1.14
hsa-miR-1268b tgcaggaCACGCCCatctt
 5
 CGGGCGUG m7b Disrupted -0.548 no TS 0.86
hsa-miR-3945 tgcaggacATGCCCatctt
 0 AGGGCAUA m6b Created -0.143 -0.316 -0.72
hsa-miR-4253 tgcaggaCATGCCCatctt
 0 AGGGCAUG m7b Created -0.133 -0.543 -3.8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.124824487A>G COSN14796462 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-421 tgtgCTGTTGAcgtagttg
 0 AUCAACAG m7b Created no TS 0.058000 -1.170000
hsa-miR-4709-5p tgtgCTGTTGacgtagttg
 0 ACAACAGU m6b Created no TS 0.028000 -2.500000
hsa-miR-505-3p tgtgcTGTTGACGtagttg
 0 CGUCAACA m8a Created no TS -0.001000 -0.070000


Mutation Mutation ID Sample Name Cancer Type
chr6:g.124824990T>C COSN5083184 HX31T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.124825288A>C COSN8793250 SS6003317 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-424-3p ttacagccACGTTTTcacc
 0 CAAAACGU m7b Created no TS -0.064000 -0.780000
hsa-miR-548ad ttacagccaCGTTTTCacc
 0 GAAAACGA m7a (m6b->m7a) NA NA No effect
hsa-miR-5582-3p ttacagccAAGTTTTcacc
 2
 UAAAACUU m7b Disrupted 0.103000 0.062000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr6:g.124825532T>A COSN9295239 AOCS-060-1-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-642a-3p tgatcctgATGTGTCcttt
 15
 AGACACAU m7b Disrupted -0.168000 no TS 0.440000
hsa-miR-642b-3p tgatcctgATGTGTCcttt
 15
 AGACACAU m7b Disrupted -0.168000 no TS 3.670000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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