| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_031419 |
|---|---|
| Gene Symbol: | NFKBIZ |
| Description: | Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta (NFKBIZ), transcript variant 2, mRNA. |
| Gene Location: | chr3(+):101568357-101579869 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.101859483A>C | COSN6711213 | RK144_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-5010-3p |
tttctatgACACAAAcata |
2 |
UUUUGUGU | m7b | Created | -0.039000 | -0.176000 |
-0.020000 |
| hsa-miR-592 |
tttctaTGACACAAacata |
0 | UUGUGUCA | m8a | Created | no TS | -0.410000 |
-0.400000 |
| hsa-miR-597 |
tttctaTGACACAaacata |
0 | UGUGUCAC | m7a | Created | no TS | -0.174000 | No effect |
| hsa-miR-599 |
tttctatGACACAAacata |
0 | GUUGUGUC | m7b | Created | no TS | -0.377000 |
-0.010000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.101859802C>T | COSN6711214 | RK190_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1915-3p |
gccttagtCCCTGGGagtt |
0 | CCCCAGGG | m7b | Disrupted | -0.378000 | no TS |
0.300000 |
| hsa-miR-211-3p |
gccttaGTCCCTGggagtt |
2 |
GCAGGGAC | m7b | Disrupted | -0.199000 | no TS |
0.020000 |
| hsa-miR-4685-5p |
gccttagtCCCTGGGagtt |
0 | CCCAGGGC | m7a | Disrupted | NA | NA | No effect |
| hsa-miR-4726-3p |
gccttagtcCCTGGGagtt |
0 | ACCCAGGU | m6b | Disrupted | -0.134000 | no TS |
0.120000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.101860145A>T | COSN1264171 | HX15T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-330-3p |
ttctcaTGCTTTGaaatta |
5 |
GCAAAGCA | m7b | Created | -0.098000 | -0.261000 |
-0.010000 |
| hsa-miR-4422 |
ttctcATGCTTTgaaatta |
0 | AAAAGCAU | m7b | Created | -0.059000 | -0.108000 |
0.140000 |
| hsa-miR-5700 |
ttctcATGCATTgaaatta |
5 |
UAAUGCAU | m7b | Disrupted | -0.041000 | no TS |
0.070000 |
| hsa-miR-607 |
ttctcatgcTTTGAAatta |
6 |
GUUCAAAU | m6b | Created | -0.022000 | 0.043000 | No effect |
| hsa-miR-330-3p |
ttctcaTGCTTTGaaatta |
0 | GCAAAGCA | m7b | Created | -0.098 | -0.261 |
-0.01 |
| hsa-miR-4422 |
ttctcATGCTTTgaaatta |
0 | AAAAGCAU | m7b | Created | -0.059 | -0.108 |
0.14 |
| hsa-miR-5700 |
ttctcATGCATTgaaatta |
5 |
UAAUGCAU | m7b | Disrupted | -0.041 | no TS |
0.07 |
| hsa-miR-607 |
ttctcatgcTTTGAAatta |
0 | GUUCAAAU | m6b | Created | -0.022 | 0.043 | No effect |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.101860440A>G | ICGC_72D285AE-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-338-3p |
tctcccaaaATGCTGGgat |
0 | UCCAGCAU | m7b | (m7b->m6c) | -0.137 | no TS |
-0.29 |
| hsa-miR-4310 |
tctcccaaAATGCTGggat |
0 | GCAGCAUU | m7b | Disrupted | -0.033 | no TS |
0.01 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.101860591A>G | COSN1902056 | RK062_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1305 |
aaagtcagtGTTGAAAcat |
2 |
UUUUCAAC | m7b | (m6c->m7b) | -0.097000 | -0.153000 |
-1.020000 |
| hsa-miR-141-3p |
aaagtCAGTGTTgaaacat |
0 | UAACACUG | m7b | Created | no TS | -0.146000 |
-4.983000 |
| hsa-miR-200a-3p |
aaagtCAGTGTTgaaacat |
0 | UAACACUG | m7b | Created | no TS | -0.146000 |
-2.670000 |
| hsa-miR-200b-3p |
aaagtCAGTATTgaaacat |
1 |
UAAUACUG | m7b | Disrupted | -0.106000 | no TS |
-0.170000 |
| hsa-miR-200c-3p |
aaagtCAGTATTgaaacat |
1 |
UAAUACUG | m7b | Disrupted | -0.106000 | no TS |
-0.170000 |
| hsa-miR-421 |
aaagtcagTGTTGAaacat |
2 |
AUCAACAG | m6b | Created | -0.312000 | -0.376000 |
-0.890000 |
| hsa-miR-429 |
aaagtCAGTATTgaaacat |
1 |
UAAUACUG | m7b | Disrupted | -0.106000 | no TS |
-0.120000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr3:g.101860650A>C | COSN8346974 | 0006_CRUK_PC_0006_T3_DNA | [prostate][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-410 |
tgatgttTTATATatatca |
1 |
AAUAUAAC | m6b | Disrupted | -0.066000 | -0.069000 |
1.950000 |
| hsa-miR-5011-5p |
tgatgtttTATATATAtca |
1 |
UAUAUAUA | m8a | Disrupted | -0.187000 | -0.019000 | No effect |
| hsa-miR-570-3p |
tgaTGTTTTCtatatatca |
0 | CGAAAACA | m7b | (m6b->m7b) | -0.017000 | -0.123000 | No effect |