SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001161407 |
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Gene Symbol: | NDFIP2 |
Description: | Homo sapiens Nedd4 family interacting protein 2 (NDFIP2), transcript variant 2, mRNA. |
Gene Location: | chr13(+):80055258-80130212 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr13:g.79556036G>A | ICGC_sm404285 | RK100_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-497-3p |
acagattGTGGTTTaattt |
0 | CAAACCAC | m7b | Disrupted | -0.507 | -0.105 |
2.44 |
hsa-miR-606 |
acagattGTAGTTTaattt |
0 | AAACUACU | m7a | Created | NA | NA |
-0.29 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr13:g.79556037G>T | ICGC_sm404286 | RK100_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-497-3p |
cagattGTGGTTTaatttt |
0 | CAAACCAC | m7b | Disrupted | -0.507 | -0.105 |
2.44 |