SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_015194 |
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Gene Symbol: | MYO1D |
Description: | Homo sapiens myosin ID (MYO1D), mRNA. |
Gene Location: | chr17(-):30819627-31203902 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.32494287A>G | COSN7164056 | 8016470 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3921 |
gctctgCTCAGAGttcggc |
0 | UCUCUGAG | m7b | Disrupted | -0.123000 | -0.099000 | No effect |
hsa-miR-4303 |
gctctGCTCAGAgttcggc |
5 |
UUCUGAGC | m7b | Disrupted | -0.072000 | no TS | No effect |
hsa-miR-4653-5p |
gctctgCTCAGAGttcggc |
0 | UCUCUGAG | m7b | Disrupted | -0.153000 | -0.120000 |
0.450000 |
hsa-miR-4680-5p |
gctctgctcAGAGTTCggc |
2 |
AGAACUCU | m7b | (m7b->m6b) | 0.015000 | no TS |
0.050000 |
hsa-miR-4714-5p |
gctctgcTCAGAGTTcggc |
2 |
AACUCUGA | m8a | Disrupted | 0.001000 | no TS |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.32494659G>T | COSN8602932 | J52_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-103a-3p |
accTGCTGCTagggcccct |
0 | AGCAGCAU | m7a | (m6b->m7a) | NA | NA |
-3.470000 |
hsa-miR-107 |
accTGCTGCTagggcccct |
0 | AGCAGCAU | m7a | (m6b->m7a) | NA | NA |
-3.330000 |
hsa-miR-15a-5p |
accTGCTGCTAgggcccct |
2 |
UAGCAGCA | m8a | Created | -0.049000 | -0.282000 |
-0.620000 |
hsa-miR-15b-5p |
accTGCTGCTAgggcccct |
2 |
UAGCAGCA | m8a | Created | -0.049000 | -0.282000 |
-0.830000 |
hsa-miR-16-5p |
accTGCTGCTAgggcccct |
2 |
UAGCAGCA | m8a | Created | -0.031000 | -0.274000 |
-3.340000 |
hsa-miR-195-5p |
accTGCTGCTAgggcccct |
2 |
UAGCAGCA | m8a | Created | -0.031000 | -0.274000 |
-0.990000 |
hsa-miR-424-5p |
accTGCTGCTagggcccct |
2 |
CAGCAGCA | m7b | (m6c->m7b) | -0.031000 | -0.264000 |
-1.540000 |
hsa-miR-4524a-5p |
acctGCTGCTAgggcccct |
0 | AUAGCAGC | m7b | Created | no TS | -0.130000 |
-0.020000 |
hsa-miR-4524b-5p |
acctGCTGCTAgggcccct |
0 | AUAGCAGC | m7b | Created | no TS | -0.130000 |
-0.010000 |
hsa-miR-497-5p |
accTGCTGCTagggcccct |
2 |
CAGCAGCA | m7b | (m6c->m7b) | -0.049000 | -0.282000 |
-0.820000 |
hsa-miR-646 |
acctGCTGCTagggcccct |
3 |
AAGCAGCU | m6b | Created | -0.077000 | -0.171000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.32494720C>T | cosmic_v64_1675358 | Melanoma | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-122-5p |
gccACACTCCgagtcctgg |
0 | UGGAGUGU | m7b | (m7b->m6c) | -0.059 | no TS | No effect |
hsa-miR-5586-3p |
gccaCACTCTGagtcctgg |
0 | CAGAGUGA | m7a | Created | NA | NA |
-0.09 |
hsa-miR-759 |
gccaCACTCTGagtcctgg |
0 | GCAGAGUG | m7b | Created | 0.019 | -0.184 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr17:g.32494737G>A | COSN5839232 | HCC170 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3187-5p |
gcctgGCCCAGagcccggc |
2 |
CCUGGGCA | m6b | Created | -0.287000 | -0.381000 |
0.010000 |
hsa-miR-326 |
gcctggCCCAGAGcccggc |
1 |
CCUCUGGG | m7b | Created | -0.297000 | -0.386000 |
-0.170000 |
hsa-miR-330-5p |
gcctggCCCAGAGcccggc |
1 |
UCUCUGGG | m7b | Created | -0.269000 | -0.320000 |
-0.010000 |
hsa-miR-378g |
gcctgGCCCAGagcccggc |
2 |
ACUGGGCU | m6b | Created | -0.359000 | -0.460000 |
0.060000 |
hsa-miR-4486 |
gcctgGCCCAGagcccggc |
0 | GCUGGGCG | m6b | Created | -0.462000 | -0.584000 | No effect |
hsa-miR-4640-5p |
gcCTGGCCCAgagcccggc |
3 |
UGGGCCAG | m8a | (m7b->m8a) | -0.108000 | -0.335000 | No effect |
hsa-miR-612 |
gcctgGCCCAGagcccggc |
2 |
GCUGGGCA | m6b | Created | -0.272000 | -0.369000 | No effect |
hsa-miR-760 |
gcctggccCAGAGCCcggc |
0 | CGGCUCUG | m7b | Created | no TS | -0.052000 | No effect |
hsa-miR-3187-5p |
gcctgGCCCAGagcccggc |
2 |
CCUGGGCA | m6b | Created | -0.287000 | -0.381000 |
0.010000 |
hsa-miR-326 |
gcctggCCCAGAGcccggc |
1 |
CCUCUGGG | m7b | Created | -0.297000 | -0.386000 |
-0.170000 |
hsa-miR-330-5p |
gcctggCCCAGAGcccggc |
1 |
UCUCUGGG | m7b | Created | -0.269000 | -0.320000 |
-0.010000 |
hsa-miR-378g |
gcctgGCCCAGagcccggc |
2 |
ACUGGGCU | m6b | Created | -0.359000 | -0.460000 |
0.060000 |
hsa-miR-4486 |
gcctgGCCCAGagcccggc |
0 | GCUGGGCG | m6b | Created | -0.462000 | -0.584000 | No effect |
hsa-miR-4640-5p |
gcCTGGCCCAgagcccggc |
3 |
UGGGCCAG | m8a | (m7b->m8a) | -0.108000 | -0.335000 | No effect |
hsa-miR-612 |
gcctgGCCCAGagcccggc |
2 |
GCUGGGCA | m6b | Created | -0.272000 | -0.369000 | No effect |
hsa-miR-760 |
gcctggccCAGAGCCcggc |
0 | CGGCUCUG | m7b | Created | no TS | -0.052000 | No effect |