SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_018657
Gene Symbol: MYNN
Description: Homo sapiens myoneurin (MYNN), transcript variant 2, mRNA.
Gene Location: chr3(+):169490852-169507504
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.169787975T>C COSN9763618 C0074T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3148 cttttTTTTTCCccccaca
 1
 UGGAAAAA m7b Disrupted 0.146000 0.155000 0.010000
hsa-miR-4525 cttttttttTCCCCCCaca
 0 GGGGGGAU m7a (m7a->m6b) NA NA -0.180000
hsa-miR-4668-5p ctttttTTTTCCCcccaca
 1
 AGGGAAAA m7b Disrupted 0.031000 0.054000 0.410000
hsa-miR-625-5p ctttttttTTCCCCCcaca
 1
 AGGGGGAA m7b Disrupted -0.101000 -0.072000 -0.080000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.169788899T>C COSN6743119 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-488-5p atttagttgTATCTGGtat
 5
 CCCAGAUA m7b (m7b->m6c) -0.139000 no TS 0.010000

Mutation Mutation ID Sample Name Cancer Type
chr3:g.169789582A>G ICGC_D911FDB8-2A78-11E2-B303-24FD496BB9B8 CPCG_0103_Pr_P_P6 ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1273d gcctccTGGGTTCaagcaa
 0 GAACCCAU m7a Created -0.052 -0.052 -12.1

Mutation Mutation ID Sample Name Cancer Type
chr3:g.169789622T>G ICGC_9A8BA328-2A78-11E2-8335-12FD496BB9B8 CPCG_0102_Pr_P_P2 ProstateCancer(OICR,CA)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5588-3p agtagcTGGGACTacaggt
 0 AAGUCCCA m7b Created -0.07 -0.385 No effect
hsa-miR-624-5p agtagcTGGTACTAcaggt
 1
 UAGUACCA m8a Disrupted -0.29 no TS 0.1
hsa-miR-634 agtaGCTGGTactacaggt
 1
 AACCAGCA m6b Disrupted -0.145 no TS -0.32

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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