SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001018116 |
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Gene Symbol: | MURC |
Description: | Homo sapiens muscle-related coiled-coil protein (MURC), mRNA. |
Gene Location: | chr9(+):103340335-103350173 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr9:g.100586468T>A | COSN15314125 | SNUH_G76_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-154-5p |
ttaagtATAACCTAaatat |
0 | UAGGUUAU | m8a | Created | no TS | 0.000000 | No effect | |
hsa-miR-651 |
ttaagtatATCCTAAAtat |
0 | UUUAGGAU | m8a | Disrupted | -0.389000 | no TS |
3.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr9:g.100586493G>C | COSN8519727 | J73_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1243 |
cctaatcATCCAGTTttag |
0 | AACUGGAU | m8a | Created | no TS | -0.274000 |
-1.050000 |
|
hsa-miR-1255a |
cctaaTCATCCagttttag |
0 | AGGAUGAG | m6b | Created | no TS | -0.168000 |
-2.320000 |
|
hsa-miR-1255b-5p |
cctaaTCATCCagttttag |
0 | CGGAUGAG | m6b | Created | no TS | -0.168000 |
-1.270000 |
|
hsa-miR-217 |
cctaatcATGCAGTtttag |
4 |
UACUGCAU | m7b | Disrupted | -0.230000 | no TS |
0.370000 |
|
hsa-miR-548av-3p |
cctaatcatGCAGTTTTag |
4 |
AAAACUGC | m8a | (m8a->m7b) | -0.229000 | no TS |
3.410000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr9:g.100587064C>T | COSN4943317 | PD3904a | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-146a-3p |
gaagcacacTCAGAGaaaa |
0 | CCUCUGAA | m6b | Created | no TS | -0.068000 |
-0.890000 |
|
hsa-miR-301a-5p |
gaagcacacTCAGAGaaaa |
0 | GCUCUGAC | m6b | Created | no TS | -0.069000 |
0.210000 |
|
hsa-miR-3191-5p |
gaagcacacCCAGAGAaaa |
4 |
CUCUCUGG | m7b | (m7b->m6c) | -0.189000 | -0.034000 |
2.740000 |
|
hsa-miR-326 |
gaagcacaCCCAGAGaaaa |
0 | CCUCUGGG | m7b | Disrupted | -0.307000 | no TS |
3.480000 |
|
hsa-miR-330-5p |
gaagcacaCCCAGAGAaaa |
0 | UCUCUGGG | m8a | Disrupted | -0.307000 | no TS |
1.500000 |
|
hsa-miR-3921 |
gaagcacaCTCAGAGAaaa |
3 |
UCUCUGAG | m8a | Created | -0.027000 | -0.249000 |
-3.290000 |
|
hsa-miR-4314 |
gaagcacaCCCAGAGaaaa |
0 | CUCUGGGA | m7a | Disrupted | NA | NA | No effect | |
hsa-miR-4455 |
gaagCACACCCagagaaaa |
2 |
AGGGUGUG | m7b | Disrupted | -0.557000 | -0.264000 |
0.710000 |
|
hsa-miR-4653-5p |
gaagcacaCTCAGAGAaaa |
3 |
UCUCUGAG | m8a | Created | -0.055000 | -0.319000 |
0.670000 |
|
hsa-miR-4658 |
gaagcACACTCAgagaaaa |
2 |
GUGAGUGU | m7b | Created | -0.099000 | -0.173000 |
-1.000000 |
|
hsa-miR-518c-5p |
gaagcacacCCAGAGAaaa |
4 |
UCUCUGGA | m7a | (m7a->m6b) | -0.087000 | no TS |
0.130000 |
|
hsa-miR-574-5p |
gaagCACACTCAgagaaaa |
0 | UGAGUGUG | m8a | Created | no TS | -0.243000 |
-7.420000 |
|
hsa-miR-609 |
gaagcACACCCagagaaaa |
0 | AGGGUGUU | m6b | Disrupted | -0.117000 | no TS |
0.090000 |
|
hsa-miR-648 |
gaaGCACACTcagagaaaa |
0 | AAGUGUGC | m7b | (m6b->m7b) | no TS | -0.156000 |
-0.080000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr9:g.100587076A>G | COSN1370840 | HX12T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3188 |
gagaaaacAAGCCTCatca |
2 |
AGAGGCUU | m7b | Disrupted | -0.356000 | -0.141000 |
1.410000 |
|
hsa-miR-485-5p |
gagaaaacaAGCCTCatca |
2 |
AGAGGCUG | m6b | Disrupted | -0.379000 | -0.304000 | No effect | |
hsa-miR-3188 |
gagaaaacAAGCCTCatca |
0 | AGAGGCUU | m7b | Disrupted | -0.356 | -0.141 |
1.41 |
|
hsa-miR-485-5p |
gagaaaacaAGCCTCatca |
0 | AGAGGCUG | m6b | Disrupted | -0.379 | -0.304 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr9:g.100587097->A | cosmic_v64_1870281 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-129-5p |
tcctcCAAAAAcagaatgga |
0 | CUUUUUGC | m6b | Created | NA | NA |
-0.010000 |
|
hsa-miR-19a-5p |
tcctcCAAAACagaatgga |
1 |
AGUUUUGC | m6b | Disrupted | 0.046000 | 0.017000 | No effect | |
hsa-miR-19b-1-5p |
tcctcCAAAACagaatgga |
1 |
AGUUUUGC | m6b | Disrupted | 0.046000 | 0.017000 | No effect | |
hsa-miR-19b-2-5p |
tcctcCAAAACagaatgga |
1 |
AGUUUUGC | m6b | Disrupted | 0.046000 | 0.017000 | No effect | |
hsa-miR-4652-3p |
tcctccaaAACAGAAtgga |
0 | GUUCUGUU | m7b | Disrupted | -0.009000 | -0.020000 | No effect | |
hsa-miR-4778-5p |
tcctccaaaACAGAATgga |
0 | AAUUCUGU | m7b | (m7b->m6c) | -0.124000 | -0.125000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr9:g.100587384G>T | 0_337 | Prostate cancer | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-802 |
taaaatTGTTACTatgttt |
5 |
CAGUAACA | m7b | Created | no TS | -0.23 |
-1.92 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
100586468 | rs190889727 | T | T |
hsa-miR-651-5p |
2 |
agtatATCCTAAA |
Disrupted |
N |
-0.389 |
A |
hsa-miR-154-5p hsa-miR-6509-5p |
2 2 |
agtATAACCTAaa agtataACCTAAA |
Created Created |
N N |
No Change -0.145 |
|||
100586497 | rs115947662 | T | T |
hsa-miR-217 hsa-miR-548a-3p hsa-miR-548ar-3p hsa-miR-548av-3p hsa-miR-548az-3p hsa-miR-548e-3p hsa-miR-548f-3p hsa-miR-5582-3p hsa-miR-6807-3p |
4 3 3 4 3 3 3 3 4 |
ATGCAGTtttagt atgCAGTTTTAgt atgCAGTTTTAgt atGCAGTTTtagt atgCAGTTTTAgt atgCAGTTTTAgt atgCAGTTTTAgt atgcAGTTTTAgt ATGCAGTtttagt |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N N |
-0.23 -0.199 -0.188 -0.229 -0.157 -0.167 -0.188 -0.004 -0.212 |
C |
hsa-miR-320a hsa-miR-320b hsa-miR-320c hsa-miR-320d hsa-miR-4429 hsa-miR-9-3p |
3 3 3 3 3 3 |
atgCAGCTTTAgt atgCAGCTTTAgt atgCAGCTTTAgt atgCAGCTTTAgt atgCAGCTTTAgt atgcAGCTTTAgt |
Created Created Created Created Created Created |
N N N N N N |
-0.294 -0.294 -0.294 -0.294 -0.294 -0.099 |