SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001204288
Gene Symbol: MUC1
Description: Homo sapiens mucin 1, cell surface associated (MUC1), transcript variant 2, mRNA.
Gene Location: chr1(-):155158299-155162706
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.155186170A>C ICGC_1288982 TCGA-AX-A0J0-01A-11D-A117-09 UterineCorpusEndometrioidCarcinoma(TCGA,US)
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3650 tcttacACACACCcagcag
 0 AGGUGUGU m7b Created no TS -0.189 -12.63
hsa-miR-4455 tcttacaCACACCCagcag
 0 AGGGUGUG m7b Created no TS -0.411 -6.54
hsa-miR-5010-3p tcttACACAAAcccagcag
 0 UUUUGUGU m7b Disrupted -0.018 no TS 4.13
hsa-miR-5087 tcttacACAAACCCagcag
 0 GGGUUUGU m8a Disrupted -0.113 no TS 7.38
hsa-miR-599 tcttACACAAacccagcag
 0 GUUGUGUC m6b Disrupted -0.03 no TS -1.41
hsa-miR-609 tcttacacACACCCagcag
 0 AGGGUGUU m6b Created no TS -0.152 -1.81

Mutation Mutation ID Sample Name Cancer Type
chr1:g.155187241G>A ICGC_ssm_v3_8619 BN24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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