| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001199729 |
|---|---|
| Gene Symbol: | MSRA |
| Description: | Homo sapiens methionine sulfoxide reductase A (MSRA), transcript variant 2, mRNA. |
| Gene Location: | chr8(+):9953065-10286401 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr8:g.10428626G>A | COSN8051185 | 8030353 | [pancreas][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-198 |
gaggttgCTGGACaggatg |
3 |
GGUCCAGA | m6b | Disrupted | -0.100000 | no TS | No effect |
| hsa-miR-3120-5p |
gaggttgctAGACAGGatg |
0 | CCUGUCUG | m7a | (m6b->m7a) | NA | NA |
-1.210000 |
| hsa-miR-4421 |
gaggttgctAGACAGGatg |
5 |
ACCUGUCU | m7b | (m6c->m7b) | -0.105000 | -0.288000 |
-1.130000 |
| hsa-miR-4530 |
gaggtTGCTGGacaggatg |
3 |
CCCAGCAG | m6b | Disrupted | -0.081000 | no TS |
2.570000 |
| hsa-miR-5699 |
gaggttgctAGACAGGAtg |
5 |
UCCUGUCU | m8a | (m7b->m8a) | -0.102000 | -0.278000 |
-0.450000 |