SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_206811 |
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Gene Symbol: | MOG |
Description: | Homo sapiens myelin oligodendrocyte glycoprotein (MOG), transcript variant alpha3, mRNA. |
Gene Location: | chr6(+):29624757-29640149 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.29671559A>T | COSN8513957 | 1428_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1183 |
gaaaatTACAGTatggtaa |
2 |
CACUGUAG | m6b | Disrupted | -0.120000 | no TS |
5.600000 |
|
hsa-miR-3607-3p |
gaaaaTTACAGTatggtaa |
0 | ACUGUAAA | m7a | Disrupted | NA | NA |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.29671943C>A | COSN9779908 | AOCS-105-1-9 | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1244 |
attcaacAACTACTacttg |
2 |
AAGUAGUU | m7b | Disrupted | -0.207000 | no TS |
3.740000 |
|
hsa-miR-4703-3p |
attcaaCAACTACtacttg |
2 |
UGUAGUUG | m7b | Disrupted | -0.191000 | no TS |
0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.29672242C>A | COSN5810910 | EOPC-03_tumor | [prostate][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4695-3p |
agcTGAGATCgtgccactg |
2 |
UGAUCUCA | m7b | (m7b->m6b) | -0.104000 | no TS |
15.180000 |
|
hsa-miR-564 |
agctgagatCGTGCCactg |
0 | AGGCACGG | m6b | Disrupted | -0.213000 | no TS |
3.760000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.29672293T>A | COSN6513612 | HCC160T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.29672305T>A | COSN9312174 | 8051716 | [pancreas][NS][carcinoid-endocrine_tumour][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.29672313T>A | COSN9312175 | 8051716 | [pancreas][NS][carcinoid-endocrine_tumour][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
29672244 | rs3135049 | C | T |
hsa-miR-564 hsa-miR-891a-3p |
0 |
agatCGTGCCAct agatcGTGCCACt |
Created Created |
N N |
-0.213 -0.163 |
C |
hsa-miR-4634 |
0 |
agaTCGCGCCAct |
Disrupted |
N |
-0.591 |