SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

RefSeq ID:	NM_153267
Gene Symbol:	MAMDC2
Description:	Homo sapiens MAM domain containing 2 (MAMDC2), mRNA.
Gene Location:	chr9(+):72658496-72841888
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation			Mutation ID		Sample Name		Cancer Type
chr9:g.70226353C>T			COSN6392726		RK308_C01		[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation			Mutation ID		Sample Name		Cancer Type
chr9:g.70226665C>A			COSN9284607		C0079T		[kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-186-5p	caatgctacATTCTTTatt	2	CAAAGAAU	m7b	(m6c->m7b)	0.039000	-0.023000	-0.090000

Mutation			Mutation ID		Sample Name		Cancer Type
chr9:g.70226746C>T			COSN7570469		8034291		[pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	Conservation	miRSeed	SeedClass	FuncClass	Wildtype CS+	Mutant CS+	PITA score change
hsa-miR-100-3p	taaagCAAGCTTaaaatgt	0	CAAGCUUG	m7b	Disrupted	-0.341000	no TS	2.810000
hsa-miR-4503	taaagcaaGCTTAAAatgt	0	UUUAAGCA	m7a	Disrupted	-0.098000	no TS	2.710000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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