SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_005461
Gene Symbol: MAFB
Description: Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) (MAFB), mRNA.
Gene Location: chr20(-):39314516-39317876
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr20:g.40686126C>A COSN1871930 RK082_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr20:g.40686127G>T COSN1871931 RK082_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-377-5p gtatgAACCTCatggtgct
 0 AGAGGUUG m6b Created no TS -0.124000 -2.980000

Mutation Mutation ID Sample Name Cancer Type
chr20:g.40686242A>T COSN1871932 RK035_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-331-5p aaaaATACCTAaataaaag
 0 CUAGGUAU m7b Created no TS -0.361000 -0.160000
hsa-miR-4678 aaaAATACCTaaataaaag
 0 AAGGUAUU m7b (m6c->m7b) no TS -0.326000 -6.820000
hsa-miR-5681b aaaAATACCTaaataaaag
 13
 AGGUAUUG m7a (m6b->m7a) -0.100000 no TS No effect
hsa-miR-331-5p aaaaATACCTAaataaaag
 0 CUAGGUAU m7b Created no TS -0.361 -0.16
hsa-miR-4678 aaaAATACCTaaataaaag
 0 AAGGUAUU m7b (m6c->m7b) no TS -0.326 -6.82
hsa-miR-5681b aaaAATACCTaaataaaag
 0 AGGUAUUG m7a (m6b->m7a) -0.1 no TS No effect

Mutation Mutation ID Sample Name Cancer Type
chr20:g.40686804A>G COSN5764743 HX31T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2117 tgctgagagAGAGAACcga
 9
 UGUUCUCU m7b (m7b->m6b) 0.006000 -0.032000 No effect
hsa-miR-4287 tgctgagAGGGAGAaccga
 0 UCUCCCUU m7a Created no TS -0.055000 No effect
hsa-miR-4469 tgctgaGAGGGAGaaccga
 0 GCUCCCUC m7b Created -0.162000 -0.314000 No effect
hsa-miR-4685-3p tgctgagAGGGAGAaccga
 0 UCUCCCUU m7a Created no TS -0.041000 No effect
hsa-miR-4723-3p tgctGAGAGGGagaaccga
 0 CCCUCUCU m7a Created NA NA No effect
hsa-miR-4768-5p tgctgagaGAGAGAAccga
 0 AUUCUCUC m7b Disrupted 0.032000 no TS No effect
hsa-miR-629-3p tgctgagaGGGAGAACcga
 0 GUUCUCCC m8a Created no TS -0.026000 No effect
hsa-miR-642a-5p tgctgAGAGGGAgaaccga
 0 GUCCCUCU m7b Created -0.120000 -0.130000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr20:g.40687098C>T COSN5764744 HX19T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4691-3p aaactccgGTGGCTGcgtg
 0 CCAGCCAC m7b Created no TS -0.026000 -1.520000

Mutation Mutation ID Sample Name Cancer Type
chr20:g.40687445G>A COSN9128382 AOCS-117-3-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-130b-5p acgaggaAAAGAGagggac
 0 ACUCUUUC m6b Created no TS 0.047000 -0.100000
hsa-miR-3124-3p acgAGGAAAGgagagggac
 1
 ACUUUCCU m7b (m7b->m6c) -0.125000 -0.154000 2.650000
hsa-miR-3183 acgaggaaaAGAGAGGgac
 0 GCCUCUCU m7b (m6b->m7b) no TS -0.131000 -0.090000
hsa-miR-4723-3p acgaggaaaAGAGAGGGac
 0 CCCUCUCU m8a (m7a->m8a) no TS -0.159000 -0.020000
hsa-miR-4753-3p acgaggaAAAGAGAgggac
 0 UUCUCUUU m7b Created no TS 0.051000 -0.060000

Mutation Mutation ID Sample Name Cancer Type
chr20:g.40687461G>C COSN8610944 3584_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1236 cgccaGGAAGAGagcaacg
 0 CCUCUUCC m7b Disrupted -0.337000 -0.180000 0.240000
hsa-miR-26b-3p cgccagGAACAGagcaacg
 0 CCUGUUCU m6b Created no TS -0.020000 0.220000
hsa-miR-3074-5p cgcCAGGAACagagcaacg
 0 GUUCCUGC m7a (m6b->m7a) NA NA 0.510000
hsa-miR-3194-3p cgccaggaaCAGAGCaacg
 5
 AGCUCUGC m6b Created -0.129000 -0.201000 -3.940000
hsa-miR-5691 cgccaggaaCAGAGCAAcg
 1
 UUGCUCUG m8a (m7a->m8a) -0.047000 -0.232000 -2.070000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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