| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_017753 |
|---|---|
| Gene Symbol: | LPPR1 |
| Description: | Homo sapiens lipid phosphate phosphatase-related protein type 1 (LPPR1), transcript variant 2, mRNA. |
| Gene Location: | chr9(+):103947316-104087417 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr9:g.101324138A>G | COSN5240672 | SS6003125 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-27a-3p |
caatgtcaaACTGTGAtga |
16 |
UUCACAGU | m7b | (m7b->m6c) | -0.204000 | no TS |
-0.110000 |
| hsa-miR-27b-3p |
caatgtcaaACTGTGAtga |
16 |
UUCACAGU | m7b | (m7b->m6c) | -0.204000 | no TS |
-0.080000 |
| hsa-miR-3681-3p |
caatgtcaaACTGTGatga |
16 |
ACACAGUG | m6b | Disrupted | -0.124000 | no TS |
0.020000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr9:g.101324217T>C | COSN8519732 | 308_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4436b-3p |
gatgtagctTGCCCTGatt |
0 | CAGGGCAG | m7a | (m7a->m6b) | NA | NA |
2.240000 |
| hsa-miR-4649-5p |
gatgtagCTCGCCCtgatt |
0 | UGGGCGAG | m7b | Created | no TS | -0.344000 |
-0.810000 |