SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_001007527
Gene Symbol: LMBRD2
Description: Homo sapiens LMBR1 domain containing 2 (LMBRD2), mRNA.
Gene Location: chr5(-):36103413-36152015
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr5:g.36103929A>G COSN9434351 AOCS-170-1-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-578 agataACAAGAAaggcact
0 CUUCUUGU m7b Created no TS -0.241000 -3.270000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser