SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_033360 |
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Gene Symbol: | KRAS |
Description: | Homo sapiens v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (KRAS), transcript variant b, mRNA. |
Gene Location: | chr12(-):25358179-25403854 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.25207349G>T | ICGC_AA0B49B6-2A78-11E2-8335-12FD496BB9B8 | CPCG_0102_Pr_P_P2 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4279 |
tatttttAGGAGAGacggg |
0 | CUCUCCUC | m7a | Disrupted | 0.029 | 0.029 |
0.01 |
hsa-miR-4684-5p |
tatttttaGTAGAGAcggg |
0 | CUCUCUAC | m7b | Created | -0.109 | -0.075 |
-0.01 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.25207929T>C | ICGC_sm403719 | RK100_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4678 |
ttttAATACCTgtaattcc |
0 | AAGGUAUU | m7b | Created | -0.205 | -0.197 | No effect |
hsa-miR-552 |
ttttaatACCTGTaattcc |
0 | AACAGGUG | m6b | Created | no TS | 0.003 |
7.65 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr12:g.25209810ACAAAG>- | ICGC_436256 | TCGA-BH-A18S-01A-11D-A12B-09 | BreastInvasiveCarcinoma(TCGA,US) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-329 |
aagtcaaagacaaaGTGTGTaattatgta |
0 | AACACACC | m6b | Disrupted | -0.160000 | no TS |
4.280000 |
hsa-miR-362-3p |
aagtcaaagacaaaGTGTGTaattatgta |
0 | AACACACC | m6b | Disrupted | -0.160000 | no TS |
3.030000 |
hsa-miR-3941 |
aagtcaaagacaaaGTGTGTAAttatgta |
0 | UUACACAC | m8a | (m8a->m7a) | -0.328000 | 0.055000 |
0.240000 |
hsa-miR-4775 |
aagtcaaagacaAAAATTAtgta |
0 | UUAAUUUU | m7b | Created | 0.778000 | 0.735000 |
-0.050000 |
hsa-miR-603 |
aagtcaaagacaaAGTGTGTaattatgta |
0 | CACACACU | m7b | Disrupted | -0.413000 | no TS |
0.090000 |
hsa-miR-329 |
aagtcaaagacaaaGTGTGTaattatgta |
0 | AACACACC | m6b | Disrupted | -0.160000 | no TS |
4.280000 |
hsa-miR-362-3p |
aagtcaaagacaaaGTGTGTaattatgta |
0 | AACACACC | m6b | Disrupted | -0.160000 | no TS |
3.030000 |
hsa-miR-3941 |
aagtcaaagacaaaGTGTGTAAttatgta |
0 | UUACACAC | m8a | (m8a->m7a) | -0.328000 | 0.055000 |
0.240000 |
hsa-miR-4775 |
aagtcaaagacaAAAATTAtgta |
0 | UUAAUUUU | m7b | Created | 0.778000 | 0.735000 |
-0.050000 |
hsa-miR-603 |
aagtcaaagacaaAGTGTGTaattatgta |
0 | CACACACU | m7b | Disrupted | -0.413000 | no TS |
0.090000 |