SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_001098500
Gene Symbol: KIAA1217
Description: Homo sapiens KIAA1217 (KIAA1217), transcript variant 2, mRNA.
Gene Location: chr10(+):23983674-24836772
Browse Associations

Somatic mutations that impact miRNA target sites




Mutation Mutation ID Sample Name Cancer Type
chr10:g.24546366A>C COSN6964565 8062308 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.24547243A>G COSN14958261 LP6005409-DNA_G03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-2681-5p tacatagacGTAAAAatac
0 GUUUUACC m6b Created no TS 0.021000 -1.330000
hsa-miR-654-3p tacatAGACATAaaaatac
0 UAUGUCUG m7a Disrupted -0.091000 no TS 0.850000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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