SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_024335
Gene Symbol: IRX6
Description: Homo sapiens iroquois homeobox 6 (IRX6), mRNA.
Gene Location: chr16(+):55358470-55364672
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.55330325G>A COSN14634934 PCSI_0022_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-450b-5p gcgatTTGCAAAAgaatct
 0 UUUUGCAA m8a Created no TS -0.214000 -1.290000
hsa-miR-518a-5p gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-527 gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-548aw gcgaTTTGCAaaagaatct
 0 GUGCAAAA m6b Created no TS -0.053000 No effect
hsa-miR-557 gcgattTGCAAAagaatct
 0 GUUUGCAC m6b Created no TS -0.075000 -7.140000
hsa-miR-450b-5p gcgatTTGCAAAAgaatct
 0 UUUUGCAA m8a Created no TS -0.214000 -1.290000
hsa-miR-518a-5p gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-527 gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-548aw gcgaTTTGCAaaagaatct
 0 GUGCAAAA m6b Created no TS -0.053000 No effect
hsa-miR-557 gcgattTGCAAAagaatct
 0 GUUUGCAC m6b Created no TS -0.075000 -7.140000
hsa-miR-450b-5p gcgatTTGCAAAAgaatct
 0 UUUUGCAA m8a Created no TS -0.214000 -1.290000
hsa-miR-518a-5p gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-527 gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-548aw gcgaTTTGCAaaagaatct
 0 GUGCAAAA m6b Created no TS -0.053000 No effect
hsa-miR-557 gcgattTGCAAAagaatct
 0 GUUUGCAC m6b Created no TS -0.075000 -7.140000
hsa-miR-450b-5p gcgatTTGCAAAAgaatct
 0 UUUUGCAA m8a Created no TS -0.214000 -1.290000
hsa-miR-518a-5p gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-527 gcgaTTTGCAaaagaatct
 0 CUGCAAAG m6b Created no TS -0.070000 No effect
hsa-miR-548aw gcgaTTTGCAaaagaatct
 0 GUGCAAAA m6b Created no TS -0.053000 No effect
hsa-miR-557 gcgattTGCAAAagaatct
 0 GUUUGCAC m6b Created no TS -0.075000 -7.140000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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