SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000619
Gene Symbol: IFNG
Description: Homo sapiens interferon, gamma (IFNG), mRNA.
Gene Location: chr12(-):68548549-68553521
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.68155121G>A COSN9474050 AOCS-119-3-9 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-103b caaGGCTATGtgattacaa
 3
 UCAUAGCC m7b (m7b->m6c) -0.266000 no TS 5.200000
hsa-miR-154-3p caaggctaTATGATTacaa
 0 AAUCAUAC m7a Created NA NA -0.150000
hsa-miR-34b-3p caaggctatGTGATTacaa
 0 CAAUCACU m6b Disrupted -0.048000 no TS 8.050000
hsa-miR-487a caaggctaTATGATTacaa
 0 AAUCAUAC m7a Created NA NA -0.236000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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