SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_016142 |
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Gene Symbol: | HSD17B12 |
Description: | Homo sapiens hydroxysteroid (17-beta) dehydrogenase 12 (HSD17B12), mRNA. |
Gene Location: | chr11(+):43702142-43878169 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr11:g.43855410->G | cosmic_v64_1870279 | NA | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4640-3p |
cttttAGGGGGTttctgaca |
0 | CACCCCCU | m7b | Created | no TS | -0.352000 |
-11.540000 |
hsa-miR-5195-5p |
ctttTAGGGGTTtctgaca |
2 |
AACCCCUA | m8a | Disrupted | -0.379000 | no TS |
0.770000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr11:g.43856591A>G | COSN1534902 | RK079_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4272 |
tttaaGTTGAATaaatata |
2 |
CAUUCAAC | m7b | Disrupted | -0.352000 | no TS |
1.380000 |
hsa-miR-4272 |
tttaaGTTGAATaaatata |
2 |
CAUUCAAC | m7b | Disrupted | -0.352 | no TS |
1.38 |