SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_002124 |
---|---|
Gene Symbol: | HLA-DRB1 |
Description: | Homo sapiens major histocompatibility complex, class II, DR beta 1 (HLA-DRB1), transcript variant 2, mRNA. |
Gene Location: | chr6(-):32546546-32557562 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.32578926T>C | 9_58967 | CRC-6-Tumor | Colorectal adenocarcinoma | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-185-3p |
ttcctCAGCCCCTgccctt |
4 |
AGGGGCUG | m8a | Created | no TS | -0.209 |
-2.58 |
|
hsa-miR-1909-3p |
ttcctcagCCCCTGCcctt |
4 |
CGCAGGGG | m7b | Created | no TS | -0.174 |
-2.64 |
|
hsa-miR-28-5p |
ttcctcAGCTCCTgccctt |
4 |
AAGGAGCU | m7b | Disrupted | -0.106 | no TS |
4.17 |
|
hsa-miR-3139 |
ttcctcAGCTCCTgccctt |
4 |
UAGGAGCU | m7b | Disrupted | -0.115 | no TS |
6.53 |
|
hsa-miR-3160-3p |
ttccTCAGCTCctgccctt |
5 |
AGAGCUGA | m7b | Disrupted | -0.103 | no TS |
4.76 |
|
hsa-miR-4656 |
ttccTCAGCCCctgccctt |
5 |
UGGGCUGA | m7b | Created | no TS | -0.139 |
-2.72 |
|
hsa-miR-4722-5p |
ttcctcagCTCCTGCCctt |
4 |
GGCAGGAG | m8a | Disrupted | -0.145 | no TS |
0.01 |
|
hsa-miR-708-5p |
ttcctcAGCTCCTgccctt |
4 |
AAGGAGCU | m7b | Disrupted | -0.106 | no TS |
5.99 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.32578981G>A | 0_257 | Prostate cancer | |||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.32579041G>A | COSN167736 | GC8_T | [stomach][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1298 |
gctttgcaGAATGAAaagc |
0 | UUCAUUCG | m7a | Created | no TS | -0.066000 |
-0.020000 |
|
hsa-miR-2276 |
gctTTGCAGAatgaaaagc |
0 | UCUGCAAG | m7a | (m6b->m7a) | no TS | -0.095000 |
-3.030000 |
|
hsa-miR-4772-3p |
gctTTGCAGGatgaaaagc |
0 | CCUGCAAC | m7a | (m7a->m6b) | no TS | -0.087000 |
-3.030000 |
|
hsa-miR-4793-5p |
gctttgCAGGATGaaaagc |
2 |
ACAUCCUG | m7b | Disrupted | -0.383000 | no TS |
3.570000 |
|
hsa-miR-5196-3p |
gctttgcAGGATGAaaagc |
2 |
UCAUCCUC | m7a | Disrupted | -0.121000 | no TS |
-4.410000 |
|
hsa-miR-544a |
gcttTGCAGAATgaaaagc |
2 |
AUUCUGCA | m8a | Created | -0.232000 | -0.411000 |
-3.270000 |
|
hsa-miR-1298 |
gctttgcaGAATGAAaagc |
0 | UUCAUUCG | m7a | Created | no TS | -0.066 |
-0.02 |
|
hsa-miR-2276 |
gctTTGCAGAatgaaaagc |
0 | UCUGCAAG | m7a | (m6b->m7a) | no TS | -0.095 |
-3.03 |
|
hsa-miR-4772-3p |
gctTTGCAGGatgaaaagc |
0 | CCUGCAAC | m7a | (m7a->m6b) | no TS | -0.087 |
-3.03 |
|
hsa-miR-4793-5p |
gctttgCAGGATGaaaagc |
0 | ACAUCCUG | m7b | Disrupted | -0.383 | no TS |
3.57 |
|
hsa-miR-5196-3p |
gctttgcAGGATGAaaagc |
0 | UCAUCCUC | m7a | Disrupted | -0.121 | no TS |
-4.41 |
|
hsa-miR-544a |
gcttTGCAGAATgaaaagc |
0 | AUUCUGCA | m8a | Created | -0.232 | -0.411 |
-3.27 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.32579051G>A | COSN167737 | GC8_T | [stomach][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-320a |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071000 |
-0.010000 |
|
hsa-miR-320b |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071000 |
-0.010000 |
|
hsa-miR-320c |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071000 |
-0.040000 |
|
hsa-miR-320d |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071000 |
-0.360000 |
|
hsa-miR-320e |
ttctgccCCAGCTTTgcag |
0 | AAAGCUGG | m8a | Created | no TS | -0.182000 |
-0.100000 |
|
hsa-miR-4429 |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071000 |
-0.010000 |
|
hsa-miR-4731-5p |
ttctgCCCCAGCtttgcag |
2 |
UGCUGGGG | m7b | Created | -0.143000 | -0.381000 | No effect | |
hsa-miR-486-3p |
ttCTGCCCCGgctttgcag |
2 |
CGGGGCAG | m8a | (m8a->m7b) | -0.286000 | -0.522000 | No effect | |
hsa-miR-5090 |
ttcTGCCCCGGctttgcag |
0 | CCGGGGCA | m8a | Disrupted | -0.311000 | no TS |
1.960000 |
|
hsa-miR-320a |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071 |
-0.01 |
|
hsa-miR-320b |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071 |
-0.01 |
|
hsa-miR-320c |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071 |
-0.04 |
|
hsa-miR-320d |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071 |
-0.36 |
|
hsa-miR-320e |
ttctgccCCAGCTTTgcag |
0 | AAAGCUGG | m8a | Created | no TS | -0.182 |
-0.1 |
|
hsa-miR-4429 |
ttctgcccCAGCTTTgcag |
0 | AAAAGCUG | m7b | Created | no TS | -0.071 |
-0.01 |
|
hsa-miR-4731-5p |
ttctgCCCCAGCtttgcag |
0 | UGCUGGGG | m7b | Created | -0.143 | -0.381 | No effect | |
hsa-miR-486-3p |
ttCTGCCCCGgctttgcag |
0 | CGGGGCAG | m8a | (m8a->m7b) | -0.286 | -0.522 | No effect | |
hsa-miR-5090 |
ttcTGCCCCGGctttgcag |
0 | CCGGGGCA | m8a | Disrupted | -0.311 | no TS |
1.96 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.32579055C>T | COSN167738 | GC8_T | [stomach][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-486-3p |
aactttCTGCCCCGgcttt |
2 |
CGGGGCAG | m8a | Disrupted | -0.286000 | no TS |
0.070000 |
|
hsa-miR-5090 |
aactttcTGCCCCGGcttt |
0 | CCGGGGCA | m8a | Disrupted | -0.311000 | no TS |
1.230000 |
|
hsa-miR-486-3p |
aactttCTGCCCCGgcttt |
0 | CGGGGCAG | m8a | Disrupted | -0.286 | no TS |
0.07 |
|
hsa-miR-5090 |
aactttcTGCCCCGGcttt |
0 | CCGGGGCA | m8a | Disrupted | -0.311 | no TS |
1.23 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr6:g.32579061T>C | COSN167739 | GC8_T | [stomach][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-148a-5p |
aggaAGAACTTTctgcccc |
0 | AAAGUUCU | m8a | Disrupted | -0.088000 | no TS |
4.350000 |
|
hsa-miR-22-5p |
agGAAGAACTttctgcccc |
3 |
AGUUCUUC | m8a | (m8a->m7b) | -0.137000 | -0.109000 |
1.100000 |
|
hsa-miR-298 |
aggaagaacCTTCTGCccc |
0 | AGCAGAAG | m7b | (m6b->m7b) | no TS | -0.090000 | No effect | |
hsa-miR-5584-3p |
aggAAGAACTttctgcccc |
0 | UAGUUCUU | m7b | (m7b->m6c) | -0.099000 | no TS |
1.070000 |
|
hsa-miR-148a-5p |
aggaAGAACTTTctgcccc |
0 | AAAGUUCU | m8a | Disrupted | -0.088 | no TS |
4.35 |
|
hsa-miR-22-5p |
agGAAGAACTttctgcccc |
0 | AGUUCUUC | m8a | (m8a->m7b) | -0.137 | -0.109 |
1.1 |
|
hsa-miR-298 |
aggaagaacCTTCTGCccc |
0 | AGCAGAAG | m7b | (m6b->m7b) | no TS | -0.09 | No effect | |
hsa-miR-5584-3p |
aggAAGAACTttctgcccc |
0 | UAGUUCUU | m7b | (m7b->m6c) | -0.099 | no TS |
1.07 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr6:g.32579076C>- | ICGC_ssm_v2_14276 | HX5T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-133a |
agatGACCAAttcaagga |
0 | UUUGGUCC | m6b | Created | NA | NA | No effect |
hsa-miR-133b |
agatGACCAAttcaagga |
0 | UUUGGUCC | m6b | Created | NA | NA | No effect |
hsa-miR-183-3p |
agatgaccAATTCAagga |
0 | GUGAAUUA | m6b | Created | no TS | 0.000000 | No effect |
hsa-miR-4452 |
agatgaccAATTCAAgga |
0 | UUGAAUUC | m7a | Created | no TS | 0.000000 | No effect |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
32578900 | rs1060190 | A | A |
hsa-miR-4731-5p hsa-miR-5589-5p |
2 2 |
CCCAGCAttgatg CCCAGCAttgatg |
Disrupted Disrupted |
N N |
-0.143 -0.153 |
T |
hsa-miR-320a hsa-miR-320b hsa-miR-320c hsa-miR-320d hsa-miR-320e hsa-miR-330-3p hsa-miR-4429 |
2 2 2 2 2 2 2 |
ccCAGCTTTgatg ccCAGCTTTgatg ccCAGCTTTgatg ccCAGCTTTgatg cCCAGCTTtgatg cccaGCTTTGAtg ccCAGCTTTgatg |
Created Created Created Created Created Created Created |
N N N N N N N |
-0.045 -0.045 -0.045 -0.045 -0.138 -0.03 -0.055 |
|||
32578900 | rs113493811 | - | - |
hsa-miR-4731-5p hsa-miR-5589-5p |
2 2 |
tCCCAGCAttgatgg tCCCAGCAttgatgg |
Unknown Unknown |
N N |
-0.143 -0.153 |
CA |
hsa-miR-3652 hsa-miR-4430 hsa-miR-4505 hsa-miR-5787 hsa-miR-647 hsa-miR-6842-3p |
2 2 2 2 2 2 |
tcCCAGCCAattgatgg tcCCAGCCAattgatgg tCCCAGCCAattgatgg tCCCAGCCAattgatgg tccCAGCCAAttgatgg tcCCAGCCAAttgatgg |
Unknown Unknown Unknown Unknown Unknown Unknown |
N N N N N N |
-0.17 -0.167 -0.442 -0.452 -0.153 -0.369 |
|||
32578903 | rs71685135 | - | - |
hsa-miR-3199 hsa-miR-365a-5p hsa-miR-365b-5p hsa-miR-4731-5p hsa-miR-5589-5p hsa-miR-8052 |
2 2 2 2 2 2 |
aAGTCCCAgcattga AAGTCCCAgcattga AAGTCCCAgcattga aagtCCCAGCAttga aagtCCCAGCAttga aAGTCCCAgcattga |
Unknown Unknown Unknown Unknown Unknown Unknown |
N N N N N N |
-0.123 -0.158 -0.158 -0.143 -0.153 -0.134 |
CA |
hsa-miR-2110 hsa-miR-3144-5p hsa-miR-3150a-3p hsa-miR-3191-3p hsa-miR-450a-2-3p hsa-miR-4652-5p hsa-miR-6763-5p hsa-miR-6810-5p hsa-miR-6857-5p |
2 3 2 3 2 2 2 2 2 |
aagTCCCCAAgcattga aaGTCCCCAagcattga aagTCCCCAAgcattga aaGTCCCCAagcattga aagTCCCCAAgcattga aAGTCCCCAagcattga aagTCCCCAAgcattga aaGTCCCCAAgcattga aagTCCCCAAgcattga |
Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown |
N N N N N N N N N |
-0.144 -0.185 -0.132 -0.206 -0.132 -0.42 -0.132 -0.42 -0.175 |
|||
32578904 | rs35306263 | - | - |
hsa-miR-3199 hsa-miR-365a-5p hsa-miR-365b-5p hsa-miR-5589-5p hsa-miR-8052 |
2 2 2 2 2 |
gaAGTCCCAgcattg gAAGTCCCAgcattg gAAGTCCCAgcattg gaagtCCCAGCAttg gaAGTCCCAgcattg |
Unknown Unknown Unknown Unknown Unknown |
N N N N N |
-0.123 -0.185 -0.185 0.004 -0.134 |
CC |
hsa-miR-1275 hsa-miR-4525 hsa-miR-4652-5p hsa-miR-4665-5p hsa-miR-4723-5p hsa-miR-4731-5p hsa-miR-5010-5p hsa-miR-5698 hsa-miR-625-5p hsa-miR-637 hsa-miR-6870-5p hsa-miR-7111-5p |
2 2 2 2 2 2 2 2 2 2 2 2 |
gaagTCCCCCAgcattg gaagTCCCCCAgcattg gaAGTCCCCcagcattg gaagTCCCCCAgcattg gaagTCCCCCAgcattg gaagtcCCCCAGCAttg gaagTCCCCCAgcattg gaagTCCCCCAgcattg gaagTCCCCCAgcattg gaagtCCCCCAGcattg gaagTCCCCCAgcattg gaagTCCCCCAgcattg |
Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown Unknown |
N N N N N N N N N N N N |
-0.178 -0.185 -0.202 -0.178 -0.174 -0.256 -0.185 -0.174 -0.175 -0.253 -0.174 -0.184 |
|||
32578905 | rs35195677 | C | C |
hsa-miR-3199 hsa-miR-365a-5p hsa-miR-365b-5p hsa-miR-4731-5p hsa-miR-5589-5p hsa-miR-8052 |
2 2 2 6 6 2 |
gaAGTCCCAgcat gAAGTCCCAgcat gAAGTCCCAgcat gaagtCCCAGCAt gaagtCCCAGCAt gaAGTCCCAgcat |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
-0.123 -0.324 -0.324 -0.143 -0.153 -0.134 |
A |
hsa-miR-134-5p hsa-miR-3118 hsa-miR-3164 hsa-miR-617 hsa-miR-6505-3p hsa-miR-6820-3p |
2 2 2 2 2 2 |
gaAGTCACAgcat gaAGTCACAgcat gAAGTCACAgcat GAAGTCAcagcat GAAGTCAcagcat gAAGTCACAgcat |
Created Created Created Created Created Created |
N N N N N N |
-0.085 -0.075 -0.208 -0.069 -0.053 -0.208 |
|||
32578907 | rs1060185 | T | T |
hsa-miR-3199 hsa-miR-365a-5p hsa-miR-365b-5p hsa-miR-8052 |
2 2 2 2 |
ctgaAGTCCCAgc ctgAAGTCCCAgc ctgAAGTCCCAgc ctgaAGTCCCAgc |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.123 -0.324 -0.324 -0.134 |
C |
hsa-miR-185-3p hsa-miR-4283 hsa-miR-4489 hsa-miR-4731-5p |
2 2 2 5 |
ctgaAGCCCCAgc ctgaAGCCCCAgc ctgaAGCCCCAgc ctgaagCCCCAGC |
Created Created Created Created |
N N N N |
-0.145 -0.154 -0.167 -0.256 |
|||
32578921 | rs1064709 | C | C |
hsa-miR-4436b-3p hsa-miR-4632-5p hsa-miR-4722-5p hsa-miR-6721-5p hsa-miR-6735-5p hsa-miR-6879-5p hsa-miR-7843-5p |
2 2 2 2 2 2 2 |
ctcCTGCCCTtgg ctcCTGCCCTtgg CTCCTGCccttgg ctCCTGCCCttgg ctcCTGCCCTtgg ctcCTGCCCTtgg ctcCTGCCCTtgg |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N |
-0.142 -0.142 -0.145 -0.209 -0.161 -0.142 -0.17 |
T |
hsa-miR-8080 |
2 |
ctccTGTCCTTgg |
Created |
N |
-0.042 |
|||
32578922 | rs3200047 | G | G |
hsa-miR-4436b-3p hsa-miR-4632-5p hsa-miR-4722-5p hsa-miR-6721-5p hsa-miR-6735-5p hsa-miR-6879-5p hsa-miR-7843-5p |
2 2 2 2 2 2 2 |
gctcCTGCCCTtg gctcCTGCCCTtg gCTCCTGCccttg gctCCTGCCCttg gctcCTGCCCTtg gctcCTGCCCTtg gctcCTGCCCTtg |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N |
-0.142 -0.142 -0.145 -0.209 -0.161 -0.142 -0.17 |
A |
hsa-miR-28-5p hsa-miR-3139 hsa-miR-6755-5p hsa-miR-708-5p |
2 2 2 2 |
GCTCCTAcccttg GCTCCTAcccttg gctcCTACCCTtg GCTCCTAcccttg |
Created Created Created Created |
N N N N |
-0.188 -0.189 -0.177 -0.188 |
|||
32578924 | rs35000099 | C | C |
hsa-miR-28-5p hsa-miR-3139 hsa-miR-4436b-3p hsa-miR-4632-5p hsa-miR-4722-5p hsa-miR-6721-5p hsa-miR-6735-5p hsa-miR-6879-5p hsa-miR-708-5p hsa-miR-7843-5p |
2 2 2 2 2 2 2 2 2 2 |
cAGCTCCTgccct cAGCTCCTgccct cagctcCTGCCCT cagctcCTGCCCT cagCTCCTGCcct cagctCCTGCCCt cagctcCTGCCCT cagctcCTGCCCT cAGCTCCTgccct cagctcCTGCCCT |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N N N |
-0.106 -0.115 -0.142 -0.142 -0.145 -0.209 -0.161 -0.142 -0.106 -0.17 |
32578926 | rs113804375 | T | T |
hsa-miR-28-5p hsa-miR-3139 hsa-miR-3160-3p hsa-miR-4722-5p hsa-miR-708-5p |
2 2 2 2 2 |
ctcAGCTCCTgcc ctcAGCTCCTgcc cTCAGCTCctgcc ctcagCTCCTGCc ctcAGCTCCTgcc |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
-0.106 -0.115 -0.103 -0.145 -0.106 |
C |
hsa-miR-1207-5p hsa-miR-185-3p hsa-miR-1909-3p hsa-miR-4656 hsa-miR-4763-3p hsa-miR-6085 hsa-miR-6722-3p hsa-miR-6813-5p |
1 2 2 2 1 2 2 2 |
ctcagcCCCTGCC ctCAGCCCCtgcc ctcagCCCCTGCc cTCAGCCCctgcc ctcagcCCCTGCC ctcAGCCCCTgcc ctcagCCCCTGCc ctcAGCCCCTgcc |
Created Created Created Created Created Created Created Created |
N N N N N N N N |
-0.179 -0.209 -0.174 -0.139 -0.16 -0.172 -0.174 -0.144 |
|||
32578930 | rs35716402 | C | C |
hsa-miR-3160-3p hsa-miR-3915 hsa-miR-3928-3p hsa-miR-7160-5p |
2 5 5 6 |
cttccTCAGCTCc cTTCCTCAgctcc cTTCCTCAgctcc cttCCTCAGCtcc |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.103 -0.038 -0.055 -0.167 |
T |
hsa-miR-4521 hsa-miR-4633-3p hsa-miR-610 hsa-miR-6500-5p hsa-miR-651-3p |
6 2 2 2 5 |
ctTCCTTAGctcc cttcctTAGCTCC cttccTTAGCTCc cttcctTAGCTCC cTTCCTTAgctcc |
Created Created Created Created Created |
N N N N N |
-0.103 -0.173 -0.087 -0.183 0.031 |
|||
32578959 | rs148582499 | - | - |
hsa-miR-1184 hsa-miR-1205 hsa-miR-17-3p hsa-miR-544a hsa-miR-6738-3p |
2 2 2 2 2 |
ggcaaCTGCAGAaaa ggcaaCTGCAGAaaa ggcaACTGCAGAaaa ggcaacTGCAGAAAa ggcaactGCAGAAAa |
Unknown Unknown Unknown Unknown Unknown |
N N N N N |
0.001 0.002 -0.219 0.009 0.002 |
CT |
hsa-miR-2467-3p hsa-miR-3158-5p hsa-miR-3678-3p |
2 2 2 |
ggcaaCTCTGCAgaaaa ggcaacTCTGCAGAaaa ggcaaCTCTGCAgaaaa |
Unknown Unknown Unknown |
N N N |
-0.106 -0.196 -0.189 |
|||
32579041 | rs36217730 | G | G |
hsa-miR-4793-5p hsa-miR-5196-3p |
2 2 |
ttgCAGGATGAaa ttgcAGGATGAaa |
Disrupted Disrupted |
N N |
-0.383 -0.121 |
A |
hsa-miR-1298-5p hsa-miR-2276-3p hsa-miR-4772-3p hsa-miR-544a |
2 2 2 2 |
ttgcaGAATGAAa TTGCAGAatgaaa TTGCAGAatgaaa tTGCAGAAtgaaa |
Created Created Created Created |
N N N N |
-0.066 -0.095 -0.087 -0.179 |
|||
32579042 | rs35324556 | G | G |
hsa-miR-4793-5p hsa-miR-5196-3p |
2 2 |
tttgCAGGATGAa tttgcAGGATGAa |
Disrupted Disrupted |
N N |
-0.383 -0.121 |
A |
hsa-miR-452-3p hsa-miR-518a-5p hsa-miR-527 hsa-miR-548aw |
2 2 2 2 |
tttgcaAGATGAA TTTGCAAgatgaa TTTGCAAgatgaa TTTGCAAgatgaa |
Created Created Created Created |
N N N N |
-0.076 -0.144 -0.144 -0.024 |
|||
32579044 | rs146292738 | C | C |
hsa-miR-4793-5p hsa-miR-518a-5p hsa-miR-527 |
2 2 2 |
gctttgCAGGATG gCTTTGCAggatg gCTTTGCAggatg |
Disrupted Disrupted Disrupted |
N N N |
-0.257 -0.045 -0.045 |
A |
hsa-miR-205-5p hsa-miR-330-3p |
2 2 |
gcttTGAAGGAtg GCTTTGAaggatg |
Created Created |
N N |
-0.12 -0.064 |
|||
32579051 | rs1064697 | A | G |
hsa-miR-5090 hsa-miR-6775-5p hsa-miR-6784-5p |
0 |
TGCCCCGgctttg TGCCCCGgctttg tGCCCCGGctttg |
Created Created Created |
N N N |
-0.311 -0.302 -0.392 |
A |
hsa-miR-320a hsa-miR-320b hsa-miR-320c hsa-miR-320d hsa-miR-320e hsa-miR-4429 hsa-miR-4731-5p hsa-miR-486-3p |
0 |
tgcccCAGCTTTg tgcccCAGCTTTg tgcccCAGCTTTg tgcccCAGCTTTg tgccCCAGCTTtg tgcccCAGCTTTg tgCCCCAGCtttg TGCCCCAgctttg |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N |
-0.071 -0.071 -0.071 -0.071 -0.182 -0.071 -0.238 -0.236 |
|||
32579055 | rs36217728 | C | C |
hsa-miR-486-3p hsa-miR-5090 hsa-miR-6775-5p hsa-miR-6784-5p |
2 0 0 0 |
tttCTGCCCCggc tttcTGCCCCGgc tttcTGCCCCGgc tttctGCCCCGGc |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.286 -0.311 -0.302 -0.392 |
32579059 | rs200538592 | T | |||||||
A |
hsa-miR-148a-5p |
0 |
GAACTTActgccc |
Created |
N |
-0.111 |
|||
32579061 | rs1064694 | C | T |
hsa-miR-148a-5p hsa-miR-5584-3p |
0 |
aAGAACTTtctgc AAGAACTttctgc |
Created Created |
N N |
-0.088 -0.099 |
C |
hsa-miR-298 |
0 |
aagaacCTTCTGC |
Disrupted |
N |
-0.09 |
|||
32579062 | rs1064692 | C | C |
hsa-miR-148a-5p hsa-miR-22-5p hsa-miR-5584-3p |
0 |
gaAGAACTTtctg GAAGAACtttctg gAAGAACTttctg |
Disrupted Disrupted Disrupted |
N N N |
-0.088 -0.137 -0.099 |
32579065 | rs201375698 | G | G |
hsa-miR-148a-5p hsa-miR-22-5p hsa-miR-5584-3p hsa-miR-6875-3p |
0 |
aaggaAGAACTTt aagGAAGAACttt aaggAAGAACTtt aaGGAAGAActtt |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.088 -0.137 -0.099 -0.17 |
A |
hsa-miR-561-3p |
0 |
aaggaaAAACTTT |
Created |
N |
-0.089 |
|||
32579066 | rs202053852 | A | A |
hsa-miR-148a-5p hsa-miR-22-5p hsa-miR-502-5p hsa-miR-5584-3p hsa-miR-6875-3p |
0 |
caaggaAGAACTT caagGAAGAACtt CAAGGAAgaactt caaggAAGAACTt caaGGAAGAActt |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
-0.088 -0.137 -0.13 -0.099 -0.17 |
G |
hsa-miR-4326 hsa-miR-4691-5p hsa-miR-5193 hsa-miR-660-3p hsa-miR-6749-3p hsa-miR-6792-3p |
3 4 4 4 4 4 |
caagGAGGAACtt caaGGAGGAActt caAGGAGGAactt caAGGAGGAactt caaGGAGGAActt caaGGAGGAActt |
Created Created Created Created Created Created |
N N N N N N |
-0.182 -0.172 -0.169 -0.153 -0.166 -0.165 |
|||
32579076 | rs41285181 | - | C | 0 |
|
||||
- |
hsa-miR-183-3p hsa-miR-219a-2-3p hsa-miR-219b-3p hsa-miR-4452 hsa-miR-5587-5p |
2 2 2 2 2 |
tgaccAATTCAA tgacCAATTCAa tgacCAATTCAa tgaccAATTCAA TGACCAAttcaa |
Unknown Unknown Unknown Unknown Unknown |
N N N N N |
No Change No Change No Change No Change No Change |
|||
32579076 | rs71822874 | - | C | 0 |
|
||||
- |
hsa-miR-183-3p hsa-miR-219a-2-3p hsa-miR-219b-3p hsa-miR-4452 hsa-miR-5587-5p |
2 2 2 2 2 |
tgaccAATTCAA tgacCAATTCAa tgacCAATTCAa tgaccAATTCAA TGACCAAttcaa |
Unknown Unknown Unknown Unknown Unknown |
N N N N N |
No Change No Change No Change No Change No Change |