| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_175611 |
|---|---|
| Gene Symbol: | GRIK1 |
| Description: | Homo sapiens glutamate receptor, ionotropic, kainate 1 (GRIK1), transcript variant 1, mRNA. |
| Gene Location: | chr21(-):30909253-31312282 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr21:g.29537161G>A | COSN1889748 | RK004_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4330 |
gattTCTGAGGagtgtgtg |
0 | CCUCAGAU | m7a | Disrupted | NA | NA |
3.500000 |
| hsa-miR-483-3p |
gatttctgAGGAGTGtgtg |
2 |
UCACUCCU | m7b | Disrupted | -0.232000 | no TS |
5.310000 |
| hsa-miR-4330 |
gattTCTGAGGagtgtgtg |
0 | CCUCAGAU | m7a | Disrupted | NA | NA |
3.5 |
| hsa-miR-483-3p |
gatttctgAGGAGTGtgtg |
0 | UCACUCCU | m7b | Disrupted | -0.232 | no TS |
5.31 |