SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_003979
Gene Symbol: GPRC5A
Description: Homo sapiens G protein-coupled receptor, family C, group 5, member A (GPRC5A), mRNA.
Gene Location: chr12(+):13043955-13066600
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.12913336T>C COSN10101166 C0079T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-130a-3p cctctcttcTTGCACTGtc
1
CAGUGCAA m8a (m8a->m7b) -0.090000 no TS 2.320000
hsa-miR-130b-3p cctctcttcTTGCACTGtc
1
CAGUGCAA m8a (m8a->m7b) -0.090000 no TS 2.980000
hsa-miR-301a-3p cctctcttcTTGCACTGtc
1
CAGUGCAA m8a (m8a->m7b) -0.062000 no TS 1.480000
hsa-miR-301b cctctcttcTTGCACTGtc
1
CAGUGCAA m8a (m8a->m7b) -0.062000 no TS 2.680000
hsa-miR-3666 cctctcttcTTGCACTGtc
1
CAGUGCAA m8a (m8a->m7b) -0.099000 no TS 0.350000
hsa-miR-4295 cctctcttcTTGCACTGtc
1
CAGUGCAA m8a (m8a->m7b) -0.043000 no TS 1.480000
hsa-miR-454-3p cctctcttcTTGCACTgtc
1
UAGUGCAA m7b (m7b->m6c) -0.071000 no TS 1.790000
hsa-miR-4722-5p cctctctTCCTGCactgtc
0 GGCAGGAG m6b Created no TS -0.086000 -4.230000
hsa-miR-5197-3p cctCTCTTCTTgcactgtc
2
AAGAAGAG m8a Disrupted -0.056000 no TS 1.900000
hsa-miR-873-5p cctctcTTCCTGCactgtc
0 GCAGGAAC m7a Created NA NA -0.140000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser