SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_153442 |
---|---|
Gene Symbol: | GPR26 |
Description: | Homo sapiens G protein-coupled receptor 26 (GPR26), mRNA. |
Gene Location: | chr10(+):125425870-125456913 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123688222C>T | COSN6944923 | 8044180 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4290 |
gtgGGAGGGCgtgggggcc |
4 |
UGCCCUCC | m7b | (m7b->m6b) | -0.547000 | -0.332000 | No effect | |
hsa-miR-4290 |
gtgGGAGGGCgtgggggcc |
4 |
UGCCCUCC | m7b | (m7b->m6b) | -0.547000 | -0.332000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123688650A>G | COSN1474937 | RK167_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-10a-5p |
ccACAGGGTAgtggtggct |
3 |
UACCCUGU | m8a | (m8a->m7a) | -0.243000 | -0.088000 | No effect | |
hsa-miR-10b-5p |
ccACAGGGTAgtggtggct |
3 |
UACCCUGU | m8a | (m8a->m7a) | -0.243000 | -0.088000 | No effect | |
hsa-miR-3620 |
ccaCAGGGTGgtggtggct |
2 |
UCACCCUG | m7b | (m6b->m7b) | -0.006000 | -0.139000 | No effect | |
hsa-miR-4999-3p |
ccacagGGTAGTGgtggct |
0 | UCACUACC | m7b | Disrupted | -0.127000 | -0.031000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123688761C>T | COSN6059745 | RK308_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4520a-3p |
tagtggCTGTCCAAttgct |
9 |
UUGGACAG | m8a | Created | -0.515000 | -0.745000 |
-0.250000 |
|
hsa-miR-4520b-3p |
tagtggcTGTCCAAttgct |
10 |
UUUGGACA | m7b | Created | -0.224000 | -0.307000 |
-0.600000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123689186T>C | COSN6944925 | 8052570 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-374b-3p |
gtaagcCTGCTAAcagaaa |
0 | CUUAGCAG | m7b | Created | no TS | 0.000000 |
-0.260000 |
|
hsa-miR-4438 |
gtaAGCCTGTtaacagaaa |
0 | CACAGGCU | m7b | (m7b->m6b) | -0.158000 | no TS |
1.000000 |
|
hsa-miR-4524a-5p |
gtaagcCTGCTAacagaaa |
0 | AUAGCAGC | m6b | Created | no TS | -0.033000 | No effect | |
hsa-miR-4524b-5p |
gtaagcCTGCTAacagaaa |
0 | AUAGCAGC | m6b | Created | no TS | -0.030000 | No effect | |
hsa-miR-4690-5p |
gtaaGCCTGCTaacagaaa |
0 | GAGCAGGC | m7b | Created | -0.700000 | -0.960000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123689442C>A | COSN9027795 | 8051723 | [pancreas][NS][carcinoid-endocrine_tumour][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-212-5p |
taataaaaaCCAAGGagag |
2 |
ACCUUGGC | m6b | Disrupted | 0.056000 | 0.061000 |
0.320000 |
|
hsa-miR-29b-2-5p |
taataaAAACCAaggagag |
5 |
CUGGUUUC | m6b | Disrupted | 0.151000 | 0.072000 |
0.010000 |
|
hsa-miR-3189-3p |
taataaaaaCCAAGGagag |
2 |
CCCUUGGG | m6b | Disrupted | -0.166000 | -0.152000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123689576C>A | COSN14944678 | LP6005409-DNA_G03 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4713-5p |
cacgGGGAGAAatggaatc |
5 |
UUCUCCCA | m7a | Created | -0.182000 | -0.178000 | No effect | |
hsa-miR-629-3p |
cacgGGGAGAAatggaatc |
1 |
GUUCUCCC | m7b | Created | 0.326000 | 0.380000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123689821C>A | COSN5248018 | HX27T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4716-5p |
tcaaagttAACATGGAgac |
1 |
UCCAUGUU | m8a | Created | 0.044000 | 0.088000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123689973A>C | COSN8919620 | SS6003317 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-617 |
ggtagctGAAGTCagccac |
3 |
AGACUUCC | m6b | Disrupted | 0.076000 | -0.007000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123690737T>A | COSN1474938 | RK079_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4263 |
acctTTAGAAaaatgttta |
6 |
AUUCUAAG | m6b | Created | 0.399000 | 0.521000 |
-0.030000 |
|
hsa-miR-4729 |
acctttagATAAATGttta |
5 |
UCAUUUAU | m7b | Disrupted | 0.119000 | no TS |
2.930000 |
|
hsa-miR-4799-5p |
accTTTAGATaaatgttta |
4 |
AUCUAAAU | m7a | (m7a->m6a) | 0.209000 | 0.320000 |
-0.010000 |
|
hsa-miR-576-5p |
acctTTAGAAaaatgttta |
6 |
AUUCUAAU | m6b | Created | 0.535000 | 0.658000 | No effect | |
hsa-miR-4263 |
acctTTAGAAaaatgttta |
0 | AUUCUAAG | m6b | Created | 0.399 | 0.521 |
-0.03 |
|
hsa-miR-4729 |
acctttagATAAATGttta |
0 | UCAUUUAU | m7b | Disrupted | 0.119 | no TS |
2.93 |
|
hsa-miR-4799-5p |
accTTTAGATaaatgttta |
0 | AUCUAAAU | m7a | (m7a->m6a) | 0.209 | 0.32 |
-0.01 |
|
hsa-miR-576-5p |
acctTTAGAAaaatgttta |
0 | AUUCUAAU | m6b | Created | 0.535 | 0.658 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123690884T>C | COSN14912321 | LP6007504-DNA_A01 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3156-5p |
caccaAGATCTTcagcatc |
5 |
AAAGAUCU | m7b | Created | 0.058000 | 0.088000 | No effect | |
hsa-miR-4668-3p |
caccaaGATTTTCagcatc |
2 |
GAAAAUCC | m7a | Disrupted | 0.641000 | 0.641000 | No effect | |
hsa-miR-4699-5p |
caccaagATCTTCagcatc |
1 |
AGAAGAUU | m6b | Created | 0.253000 | 0.323000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123691585A>G | COSN14887795 | LP6007438-DNA_A01 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-10a-5p |
agatgCAGGGTAaactagc |
3 |
UACCCUGU | m7a | Created | -0.243000 | -0.280000 | No effect | |
hsa-miR-10b-5p |
agatgCAGGGTAaactagc |
3 |
UACCCUGU | m7a | Created | -0.243000 | -0.280000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123691896->T | ICGC_sm59503 | RK006_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1193 |
ttcaaACCATCCCctaagg |
2 |
GGGAUGGU | m8a | Disrupted | -0.062000 | -0.043000 | No effect | |
hsa-miR-4271 |
ttcaaaccaTTCCCCtaagg |
0 | GGGGGAAG | m6b | Created | -0.099000 | -0.099000 | No effect | |
hsa-miR-4725-3p |
ttcaaaccaTTCCCCtaagg |
0 | UGGGGAAG | m6b | Created | -0.027000 | -0.027000 |
5.100000 |
|
hsa-miR-4790-3p |
ttcaaACCATTCccctaagg |
0 | UGAAUGGU | m7b | Created | no TS | 0.024000 |
-0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123692439T>C | COSN14569309 | 8064157 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-451b |
ggtcTCTTGCTggctccca |
0 | UAGCAAGA | m7b | Created | no TS | 0.142000 |
-0.010000 |
|
hsa-miR-451b |
ggtcTCTTGCTggctccca |
0 | UAGCAAGA | m7b | Created | no TS | 0.142000 |
-0.010000 |
|
hsa-miR-451b |
ggtcTCTTGCTggctccca |
0 | UAGCAAGA | m7b | Created | no TS | 0.142000 |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123692567G>T | COSN5248019 | HX24T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-211-3p |
acatggagGTCCCTGgtgt |
2 |
GCAGGGAC | m7b | Created | -0.237000 | -0.172000 | No effect | |
hsa-miR-3649 |
acatggAGGTCCCTggtgt |
2 |
AGGGACCU | m8a | Created | -0.101000 | -0.106000 |
-0.010000 |
|
hsa-miR-3918 |
acatggagGGCCCTGgtgt |
0 | ACAGGGCC | m7b | Disrupted | -0.036000 | -0.024000 | No effect | |
hsa-miR-4290 |
acatGGAGGGCcctggtgt |
4 |
UGCCCUCC | m7b | Disrupted | -0.547000 | -0.469000 | No effect | |
hsa-miR-4685-5p |
acatggaggGCCCTGGtgt |
2 |
CCCAGGGC | m7b | (m7b->m6c) | -0.178000 | -0.175000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123692679C>A | COSN6944928 | 8014573 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1285-5p |
gttTGAGATCagggtttag |
2 |
GAUCUCAC | m7a | (m7a->m6a) | 0.062000 | 0.123000 | No effect | |
hsa-miR-4695-3p |
gttTGAGATCAgggtttag |
2 |
UGAUCUCA | m8a | Disrupted | 0.062000 | 0.052000 |
2.680000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693057A>G | COSN5248020 | HX30T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-384 |
gccatTAGGAAacagcccc |
2 |
AUUCCUAG | m6b | Disrupted | 0.242000 | 0.131000 |
0.010000 |
|
hsa-miR-642b-5p |
gccattAGGGAACagcccc |
0 | GGUUCCCU | m7b | Created | 0.019000 | -0.003000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693109G>A | COSN5248021 | HX34T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693116G>T | COSN1474940 | RK069_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693226T>A | COSN5816774 | SS6003323 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1273g-5p |
gcagCAACCACtgtgccca |
4 |
GGUGGUUG | m7b | Created | 0.049000 | 0.068000 |
-0.040000 |
|
hsa-miR-128 |
gcagcaacCACTGTGccca |
1 |
UCACAGUG | m7b | Created | 0.088000 | 0.205000 |
-0.010000 |
|
hsa-miR-140-5p |
gcagcAACCACTGtgccca |
0 | CAGUGGUU | m8a | Created | no TS | 0.118000 | No effect | |
hsa-miR-3681-3p |
gcagcaacCACTGTGccca |
1 |
ACACAGUG | m7b | Created | 0.101000 | 0.209000 |
-0.060000 |
|
hsa-miR-377-5p |
gcagCAACCTCTgtgccca |
2 |
AGAGGUUG | m8a | Disrupted | 0.013000 | -0.063000 |
0.090000 |
|
hsa-miR-4257 |
gcagcaACCTCTGtgccca |
3 |
CCAGAGGU | m7b | Disrupted | 0.129000 | 0.095000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693359T>C | COSN195133 | PD4116a | [breast][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3692-5p |
gagcatCAGCAGGacccag |
7 |
CCUGCUGG | m7a | Created | -0.008000 | -0.005000 | No effect | |
hsa-miR-370 |
gagcatCAGCAGGacccag |
1 |
GCCUGCUG | m7b | Created | 0.027000 | 0.035000 |
-0.520000 |
|
hsa-miR-4502 |
gagCATCAGCaggacccag |
0 | GCUGAUGA | m7a | (m6a->m7a) | NA | NA |
-0.290000 |
|
hsa-miR-93-3p |
gagcaTCAGCAGgacccag |
7 |
ACUGCUGA | m7b | Created | 0.127000 | 0.212000 |
-0.010000 |
|
hsa-miR-3692-5p |
gagcatCAGCAGGacccag |
0 | CCUGCUGG | m7a | Created | -0.008 | -0.005 | No effect | |
hsa-miR-370 |
gagcatCAGCAGGacccag |
0 | GCCUGCUG | m7b | Created | 0.027 | 0.035 |
-0.52 |
|
hsa-miR-4502 |
gagCATCAGCaggacccag |
0 | GCUGAUGA | m7a | (m6a->m7a) | NA | NA |
-0.29 |
|
hsa-miR-93-3p |
gagcaTCAGCAGgacccag |
0 | ACUGCUGA | m7b | Created | 0.127 | 0.212 |
-0.01 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693745C>T | COSN14990007 | SM-4AX85 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123693936G>T | COSN5279709 | RK169_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3622a-3p |
tctgTCAGGTGtccagagg |
3 |
UCACCUGA | m7b | Created | 0.024000 | 0.091000 | No effect | |
hsa-miR-3622b-3p |
tctgTCAGGTGtccagagg |
3 |
UCACCUGA | m7b | Created | 0.075000 | 0.151000 |
-0.010000 |
|
hsa-miR-4638-3p |
tctgtcaggTGTCCAGagg |
3 |
CCUGGACA | m7b | (m6c->m7b) | 0.066000 | 0.079000 |
-0.080000 |
|
hsa-miR-4732-3p |
tctGTCAGGGgtccagagg |
2 |
GCCCUGAC | m7b | (m7b->m6b) | -0.054000 | -0.032000 |
0.270000 |
|
hsa-miR-711 |
tctgtcagGGGTCCagagg |
2 |
GGGACCCA | m6b | Disrupted | -0.165000 | -0.115000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123694458T>C | COSN1474941 | RK189_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-5571-5p |
tataAGAATTaggtctctt |
2 |
CAAUUCUC | m6b | Disrupted | 0.134000 | no TS |
-0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123694560G>T | COSN1113845 | BN26T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3120-5p |
agcaAGACAGaaaagaagg |
2 |
CCUGUCUG | m6b | Disrupted | 0.035000 | no TS |
0.010000 |
|
hsa-miR-4652-3p |
agcaagACAGAAaagaagg |
2 |
GUUCUGUU | m6b | Disrupted | 0.102000 | 0.021000 |
1.360000 |
|
hsa-miR-654-3p |
agcaAGACATAaaagaagg |
0 | UAUGUCUG | m7a | Created | 0.123000 | 0.179000 |
-0.480000 |
|
hsa-miR-3120-5p |
agcaAGACAGaaaagaagg |
2 |
CCUGUCUG | m6b | Disrupted | 0.035 | no TS |
0.02 |
|
hsa-miR-4652-3p |
agcaagACAGAAaagaagg |
2 |
GUUCUGUU | m6b | Disrupted | 0.102 | 0.021 |
1.36 |
|
hsa-miR-654-3p |
agcaAGACATAaaagaagg |
0 | UAUGUCUG | m7a | Created | 0.123 | 0.179 |
-0.48 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123694780A>C | COSN15187865 | SM-4AX86 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123696159G>A | COSN1474943 | RK089_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-329 |
tagtatgtcGTGTGTagtg |
1 |
AACACACC | m6b | Disrupted | 0.118000 | 0.096000 |
0.010000 |
|
hsa-miR-362-3p |
tagtatgtcGTGTGTagtg |
1 |
AACACACC | m6b | Disrupted | 0.114000 | 0.089000 |
0.070000 |
|
hsa-miR-3941 |
tagtatgtcGTGTGTAgtg |
1 |
UUACACAC | m7b | (m7b->m6c) | 0.089000 | 0.014000 |
0.030000 |
|
hsa-miR-4643 |
tagtatgtCATGTGTagtg |
2 |
GACACAUG | m7b | Created | 0.068000 | 0.066000 |
-0.370000 |
|
hsa-miR-466 |
tagtatgtcATGTGTAgtg |
2 |
AUACACAU | m7b | (m6c->m7b) | 0.121000 | 0.223000 |
-0.010000 |
|
hsa-miR-4717-3p |
tagtatgtCATGTGTagtg |
0 | ACACAUGG | m7a | Created | NA | NA |
-0.070000 |
|
hsa-miR-4789-3p |
tagtatgtcATGTGTagtg |
2 |
CACACAUA | m6b | Created | 0.185000 | 0.254000 |
-0.010000 |
|
hsa-miR-603 |
tagtatgtcGTGTGTagtg |
6 |
CACACACU | m6b | Disrupted | 0.217000 | 0.201000 |
0.040000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123696176G>T | COSN6059746 | RK190_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-193a-3p |
tggatGCCAGTagacaact |
2 |
AACUGGCC | m6b | Disrupted | -0.117000 | -0.076000 | No effect | |
hsa-miR-193b-3p |
tggatGCCAGTagacaact |
2 |
AACUGGCC | m6b | Disrupted | -0.117000 | -0.076000 | No effect | |
hsa-miR-3618 |
tggatgccaGTAGACAact |
0 | UGUCUACA | m7a | (m7a->m6b) | -0.013000 | -0.017000 |
0.010000 |
|
hsa-miR-4642 |
tgGATGCCATtagacaact |
3 |
AUGGCAUC | m8a | (m7a->m8a) | -0.033000 | -0.060000 | No effect | |
hsa-miR-4720-5p |
tggATGCCAGtagacaact |
1 |
CCUGGCAU | m7b | (m7b->m6b) | 0.031000 | 0.041000 | No effect | |
hsa-miR-4799-3p |
tggATGCCAGTagacaact |
1 |
ACUGGCAU | m8a | Disrupted | 0.069000 | 0.079000 |
2.160000 |
|
hsa-miR-5197-5p |
tggaTGCCATTagacaact |
2 |
CAAUGGCA | m7b | Created | 0.123000 | 0.090000 | No effect | |
hsa-miR-5588-5p |
tggATGCCAGTagacaact |
1 |
ACUGGCAU | m8a | Disrupted | 0.035000 | 0.036000 | No effect | |
hsa-miR-892b |
tggatGCCAGTagacaact |
2 |
CACUGGCU | m6b | Disrupted | -0.059000 | -0.017000 |
0.150000 |
|
hsa-miR-934 |
tggatgccAGTAGACAact |
0 | UGUCUACU | m8a | Disrupted | -0.045000 | -0.017000 |
0.700000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr10:g.123696415A>C | COSN8919621 | SS6003115 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4286 |
tctgtgaaaAGTGGGGTgg |
1 |
ACCCCACU | m8a | (m8a->m7b) | -0.238000 | -0.104000 | No effect | |
hsa-miR-5003-3p |
tctgtGAAAAGTggggtgg |
3 |
UACUUUUC | m7b | Disrupted | 0.042000 | -0.038000 | No effect | |
hsa-miR-662 |
tctgtgaaACGTGGGgtgg |
0 | UCCCACGU | m7b | Created | no TS | -0.158000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr10:g.123696548T>C | COSN1474944 | RK082_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-106a-5p |
aaatGCACTTTatatttat |
2 |
AAAAGUGC | m7b | Disrupted | -0.066000 | 0.092000 |
0.020000 |
hsa-miR-106b-5p |
aaatGCACTTTAtatttat |
2 |
UAAAGUGC | m8a | Disrupted | -0.047000 | 0.111000 |
0.010000 |
hsa-miR-142-5p |
aaatgcACTTTATatttat |
2 |
CAUAAAGU | m7b | Disrupted | 0.037000 | no TS |
0.010000 |
hsa-miR-17-5p |
aaatGCACTTTatatttat |
2 |
CAAAGUGC | m7b | Disrupted | -0.066000 | 0.092000 |
0.020000 |
hsa-miR-20a-5p |
aaatGCACTTTAtatttat |
2 |
UAAAGUGC | m8a | Disrupted | -0.055000 | 0.092000 |
0.010000 |
hsa-miR-20b-5p |
aaatGCACTTTatatttat |
2 |
CAAAGUGC | m7b | Disrupted | -0.066000 | 0.092000 | No effect |
hsa-miR-340-5p |
aaatgcaCTTTATAtttat |
2 |
UUAUAAAG | m7b | Disrupted | 0.025000 | no TS | No effect |
hsa-miR-3609 |
aaatgCACTTTatatttat |
0 | CAAAGUGA | m6b | Disrupted | 0.062000 | 0.074000 |
0.030000 |
hsa-miR-372 |
aaatGCACTTTatatttat |
0 | AAAGUGCU | m7a | Disrupted | NA | NA | No effect |
hsa-miR-519a-3p |
aaaTGCACTTTatatttat |
5 |
AAAGUGCA | m8a | Disrupted | -0.163000 | no TS |
1.910000 |
hsa-miR-519b-3p |
aaaTGCACTTTatatttat |
5 |
AAAGUGCA | m8a | Disrupted | -0.163000 | no TS |
0.030000 |
hsa-miR-519c-3p |
aaaTGCACTTTatatttat |
5 |
AAAGUGCA | m8a | Disrupted | -0.163000 | no TS |
0.020000 |
hsa-miR-519d |
aaatGCACTTTatatttat |
2 |
CAAAGUGC | m7b | Disrupted | -0.057000 | 0.111000 |
0.010000 |
hsa-miR-520a-3p |
aaatGCACTTTatatttat |
0 | AAAGUGCU | m7a | Disrupted | NA | NA |
0.310000 |
hsa-miR-520b |
aaatGCACTTTatatttat |
0 | AAAGUGCU | m7a | Disrupted | NA | NA |
0.020000 |
hsa-miR-520c-3p |
aaatGCACTTTatatttat |
0 | AAAGUGCU | m7a | Disrupted | NA | NA |
0.050000 |
hsa-miR-520d-3p |
aaatGCACTTTatatttat |
0 | AAAGUGCU | m7a | Disrupted | NA | NA |
0.020000 |
hsa-miR-520e |
aaatGCACTTTatatttat |
0 | AAAGUGCU | m7a | Disrupted | NA | NA |
0.130000 |
hsa-miR-526b-3p |
aaatGCACTTTatatttat |
2 |
GAAAGUGC | m7b | Disrupted | -0.068000 | 0.111000 |
0.850000 |
hsa-miR-548ah-5p |
aaatgCACTTTatatttat |
0 | AAAAGUGA | m6b | Disrupted | 0.068000 | 0.074000 | No effect |
hsa-miR-5586-3p |
aaatgCACTCTatatttat |
2 |
CAGAGUGA | m6b | Created | 0.118000 | 0.034000 |
-0.090000 |
hsa-miR-5590-3p |
aaatgcACTTTATatttat |
2 |
AAUAAAGU | m7b | Disrupted | 0.037000 | no TS |
0.060000 |
hsa-miR-93-5p |
aaatGCACTTTatatttat |
2 |
CAAAGUGC | m7b | Disrupted | -0.076000 | 0.092000 |
0.110000 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
123688189 | rs1878166 | A | A |
hsa-miR-4799-5p hsa-miR-6758-3p |
2 6 |
gTTTAGAAtgagg gtttaGAATGAGg |
Disrupted Disrupted |
N N |
0.01 -0.141 |
G |
hsa-miR-4793-5p hsa-miR-5009-3p hsa-miR-5196-3p hsa-miR-6072 hsa-miR-6870-3p hsa-miR-6891-3p |
4 2 4 6 6 6 |
gtttAGGATGAgg gTTTAGGAtgagg gtttAGGATGAgg gtttagGATGAGG gtttaGGATGAGg gtttagGATGAGG |
Created Created Created Created Created Created |
N N N N N N |
-0.097 -0.036 -0.095 -0.146 -0.205 -0.165 |
|||
123688379 | rs147626789 | G | |||||||
A |
hsa-miR-4717-3p hsa-miR-5589-3p hsa-miR-942-3p |
5 9 4 |
taggCCATGTGct taggcCATGTGCt tagGCCATGTgct |
Created Created Created |
N N N |
-0.108 -0.139 -0.179 |
|||
123688618 | rs142118970 | G | |||||||
T |
hsa-miR-3127-5p hsa-miR-3918 hsa-miR-4772-5p hsa-miR-5694 hsa-miR-6895-5p |
2 2 2 2 2 |
tgGCCCTGAtcta tGGCCCTGAtcta tggcCCTGATCta tggcccTGATCTA TGGCCCTgatcta |
Created Created Created Created Created |
N N N N N |
-0.177 -0.442 -0.141 -0.028 -0.231 |
|||
123689859 | rs142107543 | G | G |
hsa-miR-212-5p hsa-miR-3189-3p hsa-miR-6791-3p hsa-miR-6829-3p |
2 2 2 2 |
tCCAAGGAggcct tCCAAGGAggcct tccaAGGAGGCct tccaAGGAGGCct |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
0.046 0.054 -0.022 -0.022 |
A |
hsa-miR-1245b-5p hsa-miR-1248 hsa-miR-3142 hsa-miR-432-5p |
1 3 1 2 |
tccaagAAGGCCT tccAAGAAGGcct tccaagAAGGCCT TCCAAGAaggcct |
Created Created Created Created |
N N N N |
0.027 0.102 0.008 0.069 |
|||
123690904 | rs186290699 | T | T |
hsa-miR-590-3p |
1 |
tcaaacTAAAATT |
Disrupted |
N |
0.153 |
C |
hsa-miR-29b-2-5p hsa-miR-5087 hsa-miR-659-3p |
1 1 1 |
tcAAACCAAaatt tCAAACCAaaatt tcaAACCAAAatt |
Created Created Created |
N N N |
0.057 0.001 0.066 |
|||
123691180 | rs180952854 | G | |||||||
A |
hsa-miR-4764-5p hsa-miR-642b-5p |
2 2 |
gggaACATCCAtt GGGAACAtccatt |
Created Created |
N N |
0.031 -0.036 |
|||
123691626 | rs191145938 | G | G |
hsa-miR-3622a-3p hsa-miR-3622b-3p hsa-miR-593-5p hsa-miR-6804-3p |
6 6 8 6 |
taTCAGGTGccag taTCAGGTGccag tatcaGGTGCCAg tatCAGGTGCcag |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.022 -0.013 -0.049 -0.071 |
A |
hsa-miR-4642 hsa-miR-4720-5p hsa-miR-4799-3p hsa-miR-5588-5p |
8 9 9 9 |
tatcaGATGCCAg tatcagATGCCAG tatcagATGCCAG tatcagATGCCAG |
Created Created Created Created |
N N N N |
-0.008 -0.015 0.013 0.022 |
|||
123691628 | rs74470118 | G | G |
hsa-miR-221-5p hsa-miR-3622a-3p hsa-miR-3622b-3p hsa-miR-593-5p hsa-miR-6804-3p hsa-miR-8073 |
9 6 6 7 6 12 |
tcaggTGCCAGGA TCAGGTGccagga TCAGGTGccagga tcaGGTGCCAgga tCAGGTGCcagga tcaggTGCCAGGA |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
-0.037 -0.022 -0.013 -0.049 -0.071 -0.037 |
T |
hsa-miR-3690 hsa-miR-4254 |
22 22 |
tcaggtTCCAGGA tcaggtTCCAGGA |
Created Created |
N N |
0.002 0.016 |
|||
123691843 | rs187369955 | C | C |
hsa-miR-6850-5p |
1 |
ggtTTCCGCActt |
Disrupted |
N |
-0.089 |
T |
hsa-miR-298 hsa-miR-519a-3p hsa-miR-519b-3p hsa-miR-519c-3p |
1 1 1 1 |
ggtTTCTGCActt ggtttcTGCACTT ggtttcTGCACTT ggtttcTGCACTT |
Created Created Created Created |
N N N N |
0.073 0.045 0.036 0.045 |
|||
123691896 | rs190679053 | T | T |
hsa-miR-1193 hsa-miR-6783-5p hsa-miR-6824-5p hsa-miR-8069 |
2 2 2 2 |
aaACCATCCccta aaaccaTCCCCTA aaaccaTCCCCTA aAACCATCcccta |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.019 -0.024 -0.065 0.045 |
C |
hsa-miR-1293 hsa-miR-4278 hsa-miR-4483 hsa-miR-4651 hsa-miR-4716-3p hsa-miR-608 hsa-miR-6732-5p hsa-miR-6752-5p hsa-miR-6794-5p hsa-miR-6805-5p hsa-miR-6842-5p hsa-miR-7110-5p hsa-miR-876-3p |
2 2 2 2 2 2 2 2 2 2 2 2 2 |
aaACCACCCccta aaaccaCCCCCTA aaACCACCCccta aaaCCACCCCcta aaaccaCCCCCTA aaaCCACCCCcta aaaccACCCCCTA aaacCACCCCCta aaaccaCCCCCTA aaaccaCCCCCTA aaacCACCCCCta aaacCACCCCCta aAACCACCcccta |
Created Created Created Created Created Created Created Created Created Created Created Created Created |
N N N N N N N N N N N N N |
-0.086 -0.108 -0.067 -0.106 -0.066 -0.115 -0.112 -0.094 -0.063 -0.07 -0.103 -0.122 -0.024 |
|||
123692097 | rs17608415 | A | A |
hsa-miR-4426 hsa-miR-4647 hsa-miR-4662b hsa-miR-4699-5p hsa-miR-629-5p hsa-miR-6839-3p |
2 2 2 2 2 2 |
aaacCCATCTTca aaacCCATCTTca aaacCCATCTTca aaacccATCTTCA AAACCCAtcttca AAACCCAtcttca |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
0.039 0.02 0.02 0.077 0.028 -0.034 |
G |
hsa-miR-483-5p |
2 |
aaaCCCGTCTtca |
Created |
N |
-0.141 |
|||
123692504 | rs193284164 | T | T |
hsa-miR-1197 hsa-miR-6760-3p |
2 2 |
tgacaGTGTCCTA tGACAGTGtccta |
Disrupted Disrupted |
N N |
-0.05 0.001 |
G |
hsa-miR-10a-5p hsa-miR-10b-5p hsa-miR-339-5p hsa-miR-4725-5p hsa-miR-504-5p |
2 2 2 2 2 |
tgACAGGGTccta tgACAGGGTccta tGACAGGGtccta tgaCAGGGTCcta tgaCAGGGTCcta |
Created Created Created Created Created |
N N N N N |
0.04 0.031 -0.05 -0.055 -0.065 |
|||
123692569 | rs1356232 | C | C |
hsa-miR-3918 hsa-miR-4685-5p hsa-miR-4733-3p hsa-miR-6753-5p hsa-miR-6837-5p hsa-miR-7160-3p |
1 2 2 2 2 1 |
gagGGCCCTGgtg gaggGCCCTGGtg gagggcCCTGGTG gagggCCCTGGTg gaggGCCCTGGtg gaGGGCCCTggtg |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
-0.012 -0.003 0.05 0.042 0.025 -0.049 |
T |
hsa-miR-1233-3p hsa-miR-4687-5p |
1 1 |
gAGGGCTCtggtg GAGGGCTctggtg |
Created Created |
N N |
0.025 0.003 |
|||
123693413 | rs191654736 | G | G |
hsa-miR-4713-5p hsa-miR-629-3p hsa-miR-6867-3p |
1 1 1 |
gcagccGGGAGAA gcagccGGGAGAA gcagccGGGAGAA |
Disrupted Disrupted Disrupted |
N N N |
0.03 0.085 0.044 |
A |
hsa-miR-1976 hsa-miR-221-5p hsa-miR-3064-5p hsa-miR-4279 hsa-miR-604 hsa-miR-647 hsa-miR-6504-5p hsa-miR-6762-3p hsa-miR-8073 |
1 1 1 1 1 1 1 1 1 |
gcagcCAGGAGAa gcaGCCAGGAgaa gCAGCCAGgagaa gcagccAGGAGAA GCAGCCAggagaa GCAGCCAggagaa gCAGCCAGgagaa GCAGCCAggagaa gcaGCCAGGAgaa |
Created Created Created Created Created Created Created Created Created |
N N N N N N N N N |
0.05 0.001 -0.004 0.079 -0.029 -0.006 0.034 -0.013 0.001 |
|||
123693842 | rs80068644 | G | G |
hsa-miR-10b-3p hsa-miR-3938 hsa-miR-6883-3p |
5 3 2 |
cctaggGAATCTG cctAGGGAATctg ccTAGGGAAtctg |
Disrupted Disrupted Disrupted |
N N N |
0.073 0.044 0.02 |
A |
hsa-miR-3685 hsa-miR-384 hsa-miR-5571-3p hsa-miR-7975 |
2 2 2 2 |
ccTAGGAAAtctg cCTAGGAAAtctg CCTAGGAAatctg cCTAGGAAatctg |
Created Created Created Created |
N N N N |
0.086 0.074 -0.058 -0.009 |
|||
123693931 | rs201441423 | - | T |
hsa-miR-3660 hsa-miR-4526 hsa-miR-4732-3p |
2 2 2 |
gatCTGTCAGggg gatCTGTCAGggg gatctGTCAGGGg |
Unknown Unknown Unknown |
N N N |
0.063 0.054 -0.022 |
- |
hsa-miR-3158-5p hsa-miR-6801-3p hsa-miR-6810-3p |
2 2 2 |
gaTCTGCAGggg gatctGCAGGGG gatctGCAGGGG |
Unknown Unknown Unknown |
N N N |
0.083 -0.055 -0.055 |
|||
123693935 | rs199537189 | - | - |
hsa-miR-4732-3p hsa-miR-6846-3p hsa-miR-711 |
2 2 5 |
atctGTCAGGGgtccagag atctgtcAGGGGTCcagag atctgtcagGGGTCCAgag |
Unknown Unknown Unknown |
N N N |
-0.022 -0.047 -0.05 |
CTGT |
hsa-miR-4293 |
2 |
atctgTCAGGCTgtggtccagag |
Unknown |
N |
0.051 |
|||
123694563 | rs182566406 | A | A |
hsa-miR-1248 hsa-miR-4652-3p hsa-miR-4743-3p hsa-miR-627-3p |
3 2 2 3 |
acagaaAAGAAGG ACAGAAAagaagg ACAGAAAagaagg acAGAAAAGAagg |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
0.016 0.081 0.003 0.216 |
G |
hsa-miR-1236-3p hsa-miR-3182 hsa-miR-4753-3p hsa-miR-6515-3p hsa-miR-6809-3p hsa-miR-942-5p |
3 2 3 3 3 2 |
acaGAAGAGAagg ACAGAAGAgaagg acagAAGAGAAgg acaGAAGAGAagg acagAAGAGAAgg acagaAGAGAAGg |
Created Created Created Created Created Created |
N N N N N N |
0.076 0.117 0.108 0.079 0.143 0.062 |
|||
123695286 | rs149600213 | C | |||||||
T |
hsa-miR-4643 |
2 |
ggCATGTGTgtgt |
Created |
N |
0.133 |
|||
123695819 | rs187122195 | C | C |
hsa-miR-377-5p hsa-miR-4464 hsa-miR-4748 hsa-miR-6086 hsa-miR-655-5p |
11 11 11 11 11 |
tccaAACCTCAac tcCAAACCTcaac tcCAAACCTcaac tccaAACCTCAac tccaAACCTCAac |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
0.042 0.053 0.034 0.039 0.023 |
T |
hsa-miR-5186 |
11 |
tccaAATCTCAac |
Created |
N |
0.069 |
|||
123696159 | rs117529853 | G | G |
hsa-miR-329-3p hsa-miR-362-3p hsa-miR-3941 hsa-miR-603 |
1 1 1 1 |
tatgtcGTGTGTA tatgtcGTGTGTA tatgtcGTGTGTA tatgtcGTGTGTA |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
0.022 0.025 0.075 0.016 |
A |
hsa-miR-4643 hsa-miR-466 hsa-miR-4789-3p |
1 1 1 |
tatgtCATGTGTA tatgtcATGTGTA tatgtcATGTGTA |
Created Created Created |
N N N |
-0.002 0.102 0.069 |
|||
123696236 | rs17608529 | C | C |
hsa-miR-3605-3p hsa-miR-644a |
1 1 |
gccaCACGGAGgc GCCACACggaggc |
Disrupted Disrupted |
N N |
-0.099 -0.04 |
T |
hsa-miR-4716-5p |
1 |
gccACATGGAggc |
Created |
N |
0.057 |
|||
123696264 | rs2362672 | T | T |
hsa-miR-150-5p hsa-miR-2116-3p hsa-miR-4713-5p hsa-miR-532-3p |
2 2 2 2 |
gtccaaTGGGAGA gtccaATGGGAGA gtccaaTGGGAGA gtccaaTGGGAGA |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.003 -0.072 -0.074 -0.016 |
123696265 | rs17676917 | G | G |
hsa-miR-150-5p hsa-miR-2116-3p hsa-miR-4713-5p hsa-miR-532-3p hsa-miR-629-3p hsa-miR-6867-3p |
2 2 2 2 2 2 |
tccaaTGGGAGAa tccaATGGGAGAa tccaaTGGGAGAA tccaaTGGGAGAa tccaatGGGAGAA tccaatGGGAGAA |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
-0.003 -0.072 -0.094 -0.016 -0.004 -0.023 |
A |
hsa-miR-4279 |
2 |
tccaatAGGAGAA |
Created |
N |
0.028 |
|||
123696392 | rs116622326 | C | C |
hsa-miR-3121-3p |
1 |
tagatTCTATTTt |
Disrupted |
N |
-0.017 |
T |
hsa-miR-3163 hsa-miR-4668-3p |
1 1 |
tagATTTTATttt taGATTTTAtttt |
Created Created |
N N |
0.136 0.068 |
|||
123696421 | rs147836450 | G | G |
hsa-miR-4286 |
3 |
AGTGGGGtgggga |
Disrupted |
N |
-0.212 |
A |
hsa-miR-3156-3p hsa-miR-4301 |
3 3 |
AGTGGGAtgggga AGTGGGAtgggga |
Created Created |
N N |
-0.118 -0.093 |
|||
123696594 | rs17608655 | T | T |
hsa-miR-4263 hsa-miR-4799-5p hsa-miR-576-5p hsa-miR-605-5p |
8 8 8 9 |
aggatTTAGAAAa aggATTTAGAAaa aggatTTAGAAAa aGGATTTAgaaaa |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
0.029 0.052 0.037 -0.002 |
C |
hsa-miR-4427 hsa-miR-4680-3p hsa-miR-4762-3p hsa-miR-5187-3p |
9 9 8 9 |
aggATTCAGAaaa aggATTCAGAaaa aggatTCAGAAAa agGATTCAGAaaa |
Created Created Created Created |
N N N N |
-0.004 -0.001 -0.022 -0.176 |
|||
123696690 | rs144930423 | G | G |
hsa-miR-1250-3p hsa-miR-3685 hsa-miR-384 |
7 8 8 |
tcttagGAAAATG tctTAGGAAAatg tctTAGGAAAatg |
Disrupted Disrupted Disrupted |
N N N |
0.113 -0.013 -0.001 |
A |
hsa-miR-153-5p hsa-miR-4263 hsa-miR-576-5p |
7 3 3 |
tcttagAAAAATG tCTTAGAAAaatg tcTTAGAAAaatg |
Created Created Created |
N N N |
0.142 -0.051 0.048 |
|||
123697352 | rs148337611 | - | A |
hsa-miR-339-5p hsa-miR-4446-5p hsa-miR-4755-5p hsa-miR-5006-3p hsa-miR-670-5p |
3 3 3 3 2 |
ACAGGGAaaaagt acAGGGAAAAagt acAGGGAAAaagt acAGGGAAAaagt aCAGGGAAaaagt |
Unknown Unknown Unknown Unknown Unknown |
N N N N N |
-0.002 -0.011 -0.005 -0.005 -0.004 |
- |
hsa-miR-5003-3p |
4 |
acaggGAAAAGT |
Unknown |
N |
-0.188 |