SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000145 |
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Gene Symbol: | FSHR |
Description: | Homo sapiens follicle stimulating hormone receptor (FSHR), transcript variant 1, mRNA. |
Gene Location: | chr2(-):49189295-49381666 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.48962353C>T | COSN9376469 | AOCS-056-1-X | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-590-3p |
tgacttgttTAAAATTgtt |
0 | UAAUUUUA | m7b | (m6b->m7b) | no TS | -0.011000 |
-2.260000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.48962411T>A | COSN15045628 | LP6005500-DNA_B01 | [oesophagus][NS][carcinoma][adenocarcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3938 |
ggacAGGGAATattcttgg |
0 | AAUUCCCU | m7b | Created | no TS | -0.288000 |
-3.140000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.48962466A>C | COSN9376470 | AOCS-153-1-2 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.48962597G>T | COSN7131646 | 8069446 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.48962661A>C | COSN5792937 | HCC171 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr2:g.48962703G>A | COSN8609294 | J65_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-200b-3p |
ctgAGTATTAaatgataat |
0 | UAAUACUG | m7a | (m6b->m7a) | no TS | -0.057000 |
-1.560000 |
hsa-miR-200c-3p |
ctgAGTATTAaatgataat |
0 | UAAUACUG | m7a | (m6b->m7a) | no TS | -0.057000 |
-1.550000 |
hsa-miR-374c-5p |
ctgaGTATTAaatgataat |
1 |
AUAAUACA | m6b | Created | -0.119000 | -0.176000 |
-0.020000 |
hsa-miR-382-3p |
ctgagtattGAATGATaat |
5 |
AAUCAUUC | m7b | (m7b->m6b) | -0.322000 | -0.077000 |
1.820000 |
hsa-miR-4272 |
ctgagtaTTGAATGataat |
0 | CAUUCAAC | m7a | Disrupted | NA | NA |
0.010000 |
hsa-miR-429 |
ctgAGTATTAaatgataat |
0 | UAAUACUG | m7a | (m6b->m7a) | no TS | -0.057000 |
0.460000 |
hsa-miR-5696 |
ctgagtatTAAATGAtaat |
0 | CUCAUUUA | m7b | Created | no TS | -0.128000 |
-1.440000 |
hsa-miR-655 |
ctgaGTATTAaatgataat |
1 |
AUAAUACA | m6b | Created | -0.119000 | -0.176000 |
-0.030000 |